Gene name: YEL077C
Reference locus (S288C): YEL077C
Gene biotype: protein_coding
Description: Y' element atp-dependent helicase yel077c; Helicase-like protein encoded within the telomeric Y' element
Top 10 interactors (score): YEL076C (0.955); YEL075C (0.949); YEL075W-A (0.933); YEL074W (0.931); YRF1-7 (0.873); YRF1-4 (0.873); YRF1-6 (0.873); YLL067C (0.873); YHL050C (0.873); YBL113C (0.873); YRF1-1 (0.873); YJL225C (0.873); YRF1-5 (0.873); YRF1-3 (0.873); YRF1-2 (0.873); YIL177C (0.873); YFL066C (0.872); YHR219W (0.872); YML133C (0.872); YBL112C (0.872)
Homologues (species, bitscore): EIF4A1 (Homo sapiens, 50.8); Eif4a1 (Mus musculus, 50.8); eif4a2 (Danio rerio, 50.8); eif4a1 (Xenopus tropicalis, 51.2); CG15765 (Drosophila melanogaster, 75.9)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000149.1:1-486:- | gene-YEL077C_BG1 | rna-NM_001184302.1_BG1 | cds-NP_010835.1_BG1 | 10.0 | 10.3 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005511.1:800-5074:- | gene-YEL077C_Bruggeman | rna-NM_001184302.1_Bruggeman | cds-NP_010835.1_Bruggeman | 12.8 | 24.3 | Unannotated | 1 | 1 | 0 | False | False | True | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005528.1:33-3425:- | gene-YEL077C_CAT1 | rna-NM_001184302.1_CAT1 | cds-NP_010835.1_CAT1 | 60.4 | 88.4 | Unannotated | 1 | 1 | 0 | False | False | False | False | True |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005335.1:1-1113:- | gene-YEL077C_CBS6412 | rna-NM_001184302.1_CBS6412 | cds-NP_010835.1_CBS6412 | 27.7 | 29.0 | Mismatch | 1 | 1 | 0 | False | False | True | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | JH711472.1:1-391:+ | gene-YEL077C_CENPK1137D | rna-NM_001184302.1_CENPK1137D | cds-NP_010835.1_CENPK1137D | 10.1 | 10.1 | Mismatch | 1 | 1 | 0 | False | False | True | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000196.1:1-306:+ | gene-YEL077C_JAY291 | rna-NM_001184302.1_JAY291 | cds-NP_010835.1_JAY291 | 7.9 | 7.9 | Mismatch | 1 | 1 | 0 | False | False | True | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005448.1:1-2509:- | gene-YEL077C_MUCL30388 | rna-NM_001184302.1_MUCL30388 | cds-NP_010835.1_MUCL30388 | 54.6 | 65.1 | Unannotated | 1 | 1 | 0 | False | False | True | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | MBVN01000082.1:1-710:+ | gene-YEL077C_MUCL39482 | rna-NM_001184302.1_MUCL39482 | cds-NP_010835.1_MUCL39482 | 16.4 | 17.5 | Mismatch | 1 | 1 | 0 | False | False | True | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005427.1:562302-565004:+ | gene-YEL077C_MUCL42920 | rna-NM_001184302.1_MUCL42920 | cds-NP_010835.1_MUCL42920 | 61.8 | 70.1 | Unannotated | 1 | 1 | 0 | False | False | True | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011814.1:263-4096:- | gene-YEL077C_NCIM3186 | rna-NM_001184302.1_NCIM3186 | cds-NP_010835.1_NCIM3186 | 96.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994148.1:271-3187:- | gene-YEL077C_PE2H3 | rna-NM_001184302.1_PE2H3 | cds-NP_010835.1_PE2H3 | 51.0 | 69.3 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999878.1:1117202-1120461:+ | gene-YEL077C_PE2H4 | rna-NM_001184302.1_PE2H4 | cds-NP_010835.1_PE2H4 | 80.7 | 84.6 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001137.3:264-4097:- | gene-YEL077C_S288C | rna-NM_001184302.1_S288C | cds-NP_010835.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005464.1:3-829:- | gene-YEL077C_VR1 | rna-NM_001184302.1_VR1 | cds-NP_010835.1_VR1 | 20.4 | 21.5 | Unannotated | 1 | 1 | 0 | False | False | True | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047488.1:7331-11018:- | gene-YEL077C_Sparadoxus | rna-NM_001184302.1_Sparadoxus | cds-NP_010835.1_Sparadoxus | 94.6 | 96.1 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |