YEA4 (YEL004W)


Gene profile

Gene name: YEA4
Reference locus (S288C): YEL004W
Gene biotype: protein_coding

Description: Solute carrier family 35 (udp-xylose/udp-n-acetylglucosamine transporter), member b4; UDP-N-acetylglucosamine transporter YEA4; Uridine diphosphate-N-acetylglucosamine (UDP-GlcNAc) transporter; required for cell wall chitin synthesis; localized to the ER

Top 10 interactors (score): YMD8 (0.962); HUT1 (0.91); VRG4 (0.886); HVG1 (0.862); QRI1 (0.802); DIE2 (0.793); THI74 (0.783); ALG12 (0.768); SLY41 (0.764); CHS7 (0.635); AMD1 (0.632); CAB4 (0.608); CHS5 (0.59); DIC1 (0.587); GDA1 (0.56); YER039C-A (0.548); MCH5 (0.525); KRE5 (0.523); PDR17 (0.523); LAS21 (0.514)

Homologues (species, bitscore): SLC35B4 (Homo sapiens, 156.8); Slc35b4 (Mus musculus, 156.4); slc35b4 (Danio rerio, 162.2); Efr (Drosophila melanogaster, 165.2); nstp-2 (Caenorhabditis elegans, 132.9)

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005299.1:140632-141660:+ gene-YEL004W_AKU4011 rna-NM_001178819.1_AKU4011 cds-NP_010912.1_AKU4011 99.8 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000011.1:284010-285038:- gene-YEL004W_BG1 rna-NM_001178819.1_BG1 cds-NP_010912.1_BG1 99.8 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005507.1:147164-148192:+ gene-YEL004W_Bruggeman rna-NM_001178819.1_Bruggeman cds-NP_010912.1_Bruggeman 99.8 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005523.1:143561-144589:+ gene-YEL004W_CAT1 rna-NM_001178819.1_CAT1 cds-NP_010912.1_CAT1 99.8 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005363.1:140941-141969:+ gene-YEL004W_CBS1585 rna-NM_001178819.1_CBS1585 cds-NP_010912.1_CBS1585 99.8 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005347.1:142220-143248:+ gene-YEL004W_CBS436 rna-NM_001178819.1_CBS436 cds-NP_010912.1_CBS436 100.0 100.0 Mismatch 1 1 1 True True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005331.1:140835-141863:+ gene-YEL004W_CBS6412 rna-NM_001178819.1_CBS6412 cds-NP_010912.1_CBS6412 99.8 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005315.1:145483-146511:+ gene-YEL004W_CBS6413 rna-NM_001178819.1_CBS6413 cds-NP_010912.1_CBS6413 99.8 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001526.1:144778-145806:+ gene-YEL004W_CENPK1137D rna-NM_001178819.1_CENPK1137D cds-NP_010912.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005475.1:141298-142326:+ gene-YEL004W_EthanolRed rna-NM_001178819.1_EthanolRed cds-NP_010912.1_EthanolRed 99.8 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005539.1:141557-142585:+ gene-YEL004W_FaliES1 rna-NM_001178819.1_FaliES1 cds-NP_010912.1_FaliES1 99.8 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000024.1:8535-9563:+ gene-YEL004W_JAY291 rna-NM_001178819.1_JAY291 cds-NP_010912.1_JAY291 99.8 100.0 Verified 1 1 1 False True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005411.1:144866-145894:+ gene-YEL004W_MUCL30387 rna-NM_001178819.1_MUCL30387 cds-NP_010912.1_MUCL30387 99.8 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005443.1:141388-142416:+ gene-YEL004W_MUCL30388 rna-NM_001178819.1_MUCL30388 cds-NP_010912.1_MUCL30388 99.9 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005283.1:139977-141005:+ gene-YEL004W_MUCL39482 rna-NM_001178819.1_MUCL39482 cds-NP_010912.1_MUCL39482 99.8 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005427.1:144573-145601:+ gene-YEL004W_MUCL42920 rna-NM_001178819.1_MUCL42920 cds-NP_010912.1_MUCL42920 99.9 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011814.1:146950-147978:+ gene-YEL004W_NCIM3186 rna-NM_001178819.1_NCIM3186 cds-NP_010912.1_NCIM3186 99.3 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005267.1:145053-146081:+ gene-YEL004W_NCYC1407 rna-NM_001178819.1_NCYC1407 cds-NP_010912.1_NCYC1407 99.8 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994144.1:149363-150391:+ gene-YEL004W_PE2H3 rna-NM_001178819.1_PE2H3 cds-NP_010912.1_PE2H3 99.8 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999876.1:145278-146306:+ gene-YEL004W_PE2H4 rna-NM_001178819.1_PE2H4 cds-NP_010912.1_PE2H4 99.8 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001137.3:146951-147979:+ gene-YEL004W_S288C rna-NM_001178819.1_S288C cds-NP_010912.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000020.1:95612-96640:- gene-YEL004W_SA1 rna-NM_001178819.1_SA1 cds-NP_010912.1_SA1 99.9 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005491.1:141963-142991:+ gene-YEL004W_ThermosaccDry rna-NM_001178819.1_ThermosaccDry cds-NP_010912.1_ThermosaccDry 99.8 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005459.1:141454-142482:+ gene-YEL004W_VR1 rna-NM_001178819.1_VR1 cds-NP_010912.1_VR1 99.8 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000009.1:139990-141018:+ gene-YEL004W_ZTW1 rna-NM_001178819.1_ZTW1 cds-NP_010912.1_ZTW1 99.8 100.0 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047491.1:144658-145686:+ gene-YEL004W_Sparadoxus rna-NM_001178819.1_Sparadoxus cds-NP_010912.1_Sparadoxus 88.3 100.0 Verified 1 1 1 False True False False False

Additional files