YDR524W-C (YDR524W-C)


Gene profile

Gene name: YDR524W-C
Reference locus (S288C): YDR524W-C
Gene biotype: protein_coding

Description: Uncharacterized protein YDR524W-C; Putative protein of unknown function; small ORF identified by SAGE; deletion strains are moderately sensitive to the radiomimetic drug bleomycin

Top 10 interactors (score): YPL142C (0.836); YGL102C (0.76); YKL153W (0.738); OPI11 (0.65); YDL228C (0.601); YCR013C (0.568); YBL077W (0.564); BUD19 (0.533); YLR076C (0.468); CWH41 (0.465); KRE5 (0.43); FYV8 (0.404); BCK1 (0.4)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005298.1:1429443-1429532:+ gene-YDR524W-C_AKU4011 rna-NM_001184632.3_AKU4011 cds-NP_878066.3_AKU4011 100.0 100.0 Mismatch 1 1 1 True True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000073.1:71068-71157:+ gene-YDR524W-C_BG1 rna-NM_001184632.3_BG1 cds-NP_878066.3_BG1 98.8 100.0 Mismatch 1 1 1 True True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005506.1:1460737-1460826:+ gene-YDR524W-C_Bruggeman rna-NM_001184632.3_Bruggeman cds-NP_878066.3_Bruggeman 100.0 100.0 Mismatch 1 1 1 True True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005522.1:1437899-1437988:+ gene-YDR524W-C_CAT1 rna-NM_001184632.3_CAT1 cds-NP_878066.3_CAT1 100.0 100.0 Mismatch 1 1 1 True True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005362.1:1424171-1424260:+ gene-YDR524W-C_CBS1585 rna-NM_001184632.3_CBS1585 cds-NP_878066.3_CBS1585 100.0 100.0 Mismatch 1 1 1 True True False False False
CBS436 GCA_001738355.1 Sake Asia CM005346.1:1443377-1443466:+ gene-YDR524W-C_CBS436 rna-NM_001184632.3_CBS436 cds-NP_878066.3_CBS436 100.0 100.0 Mismatch 1 1 1 True True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005330.1:1419334-1419423:+ gene-YDR524W-C_CBS6412 rna-NM_001184632.3_CBS6412 cds-NP_878066.3_CBS6412 100.0 100.0 Mismatch 1 1 1 True True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005314.1:1442831-1442920:+ gene-YDR524W-C_CBS6413 rna-NM_001184632.3_CBS6413 cds-NP_878066.3_CBS6413 100.0 100.0 Mismatch 1 1 1 True True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001525.1:1488088-1488176:+ gene-YDR524W-C_CENPK1137D rna-NM_001184632.3_CENPK1137D cds-NP_878066.3_CENPK1137D 98.8 98.8 Mismatch 1 1 0 False False False True False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005474.1:1432703-1432792:+ gene-YDR524W-C_EthanolRed rna-NM_001184632.3_EthanolRed cds-NP_878066.3_EthanolRed 100.0 100.0 Mismatch 1 1 1 True True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005538.1:1436255-1436344:+ gene-YDR524W-C_FaliES1 rna-NM_001184632.3_FaliES1 cds-NP_878066.3_FaliES1 100.0 100.0 Mismatch 1 1 1 True True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000026.1:134599-134688:+ gene-YDR524W-C_JAY291 rna-NM_001184632.3_JAY291 cds-NP_878066.3_JAY291 98.8 100.0 Mismatch 1 1 1 True True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005410.1:1443830-1443919:+ gene-YDR524W-C_MUCL30387 rna-NM_001184632.3_MUCL30387 cds-NP_878066.3_MUCL30387 100.0 100.0 Mismatch 1 1 1 True True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005442.1:1425273-1425362:+ gene-YDR524W-C_MUCL30388 rna-NM_001184632.3_MUCL30388 cds-NP_878066.3_MUCL30388 100.0 100.0 Mismatch 1 1 1 True True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005282.1:1415669-1415758:+ gene-YDR524W-C_MUCL39482 rna-NM_001184632.3_MUCL39482 cds-NP_878066.3_MUCL39482 100.0 100.0 Mismatch 1 1 1 True True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005426.1:1358305-1358394:+ gene-YDR524W-C_MUCL42920 rna-NM_001184632.3_MUCL42920 cds-NP_878066.3_MUCL42920 100.0 100.0 Mismatch 1 1 1 True True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011813.1:1489326-1489415:+ gene-YDR524W-C_NCIM3186 rna-NM_001184632.3_NCIM3186 cds-NP_878066.3_NCIM3186 100.0 100.0 Mismatch 1 1 1 True True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005266.1:1428961-1429050:+ gene-YDR524W-C_NCYC1407 rna-NM_001184632.3_NCYC1407 cds-NP_878066.3_NCYC1407 100.0 100.0 Mismatch 1 1 1 True True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994143.1:1439867-1439956:+ gene-YDR524W-C_PE2H3 rna-NM_001184632.3_PE2H3 cds-NP_878066.3_PE2H3 98.8 100.0 Mismatch 1 1 1 True True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999875.1:1445335-1445424:+ gene-YDR524W-C_PE2H4 rna-NM_001184632.3_PE2H4 cds-NP_878066.3_PE2H4 98.8 100.0 Mismatch 1 1 1 True True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001136.10:1489403-1489492:+ gene-YDR524W-C_S288C rna-NM_001184632.3_S288C cds-NP_878066.3_S288C 100.0 100.0 Mismatch 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000004.1:127621-127710:- gene-YDR524W-C_SA1 rna-NM_001184632.3_SA1 cds-NP_878066.3_SA1 98.8 100.0 Mismatch 1 1 1 True True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005490.1:1440477-1440566:+ gene-YDR524W-C_ThermosaccDry rna-NM_001184632.3_ThermosaccDry cds-NP_878066.3_ThermosaccDry 100.0 100.0 Mismatch 1 1 1 True True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005458.1:1456249-1456338:+ gene-YDR524W-C_VR1 rna-NM_001184632.3_VR1 cds-NP_878066.3_VR1 98.8 100.0 Mismatch 1 1 1 True True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000008.1:483119-483208:+ gene-YDR524W-C_ZTW1 rna-NM_001184632.3_ZTW1 cds-NP_878066.3_ZTW1 100.0 100.0 Mismatch 1 1 1 True True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047490.1:1449417-1449506:+ gene-YDR524W-C_Sparadoxus rna-NM_001184632.3_Sparadoxus cds-NP_878066.3_Sparadoxus 97.7 100.0 Mismatch 1 1 1 False True False False False

Additional files