Gene name: YDR341C
Reference locus (S288C): YDR341C
Gene biotype: protein_coding
Description: Arginine--tRNA ligase, cytoplasmic; Arginyl-tRNA synthetase; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; YDR341C has a paralog, MSR1, that arose from the whole genome duplication
Top 10 interactors (score): NAM2 (0.995); MES1 (0.992); CDC60 (0.991); SES1 (0.989); GUS1 (0.975); TYS1 (0.974); GLN4 (0.971); ILS1 (0.969); KRS1 (0.961); DPS1 (0.959); MSE1 (0.953); DED81 (0.953); DIA4 (0.943); GRS1 (0.937); MSM1 (0.936); ARC1 (0.924); VAS1 (0.922); YNL247W (0.908); ISM1 (0.896); MSY1 (0.87)
Homologues (species, bitscore): RARS2 (Homo sapiens, 424.1); Rars2 (Mus musculus, 424.1); rars2 (Danio rerio, 415.2); rars2 (Xenopus tropicalis, 372.5); CG10092 (Drosophila melanogaster, 287.3); rars-2 (Caenorhabditis elegans, 209.1); AT1G66530 (Arabidopsis thaliana, 214.2)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005298.1:1097587-1099410:- | gene-YDR341C_AKU4011 | rna-NM_001180649.3_AKU4011 | cds-NP_010628.3_AKU4011 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000189.1:516-2339:- | gene-YDR341C_BG1 | rna-NM_001180649.3_BG1 | cds-NP_010628.3_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005506.1:1125963-1127786:- | gene-YDR341C_Bruggeman | rna-NM_001180649.3_Bruggeman | cds-NP_010628.3_Bruggeman | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005522.1:1112130-1113953:- | gene-YDR341C_CAT1 | rna-NM_001180649.3_CAT1 | cds-NP_010628.3_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005362.1:1092031-1093854:- | gene-YDR341C_CBS1585 | rna-NM_001180649.3_CBS1585 | cds-NP_010628.3_CBS1585 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005346.1:1110670-1112493:- | gene-YDR341C_CBS436 | rna-NM_001180649.3_CBS436 | cds-NP_010628.3_CBS436 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005330.1:1088719-1090542:- | gene-YDR341C_CBS6412 | rna-NM_001180649.3_CBS6412 | cds-NP_010628.3_CBS6412 | 99.1 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005314.1:1110210-1112033:- | gene-YDR341C_CBS6413 | rna-NM_001180649.3_CBS6413 | cds-NP_010628.3_CBS6413 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001525.1:1150455-1152278:- | gene-YDR341C_CENPK1137D | rna-NM_001180649.3_CENPK1137D | cds-NP_010628.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005478.1:273127-274950:- | gene-YDR341C_EthanolRed | rna-NM_001180649.3_EthanolRed | cds-NP_010628.3_EthanolRed | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005538.1:1104342-1106165:- | gene-YDR341C_FaliES1 | rna-NM_001180649.3_FaliES1 | cds-NP_010628.3_FaliES1 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000362.1:1935-3758:+ | gene-YDR341C_JAY291 | rna-NM_001180649.3_JAY291 | cds-NP_010628.3_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005410.1:1111053-1112876:- | gene-YDR341C_MUCL30387 | rna-NM_001180649.3_MUCL30387 | cds-NP_010628.3_MUCL30387 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005442.1:1099588-1101411:- | gene-YDR341C_MUCL30388 | rna-NM_001180649.3_MUCL30388 | cds-NP_010628.3_MUCL30388 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005282.1:1083838-1085661:- | gene-YDR341C_MUCL39482 | rna-NM_001180649.3_MUCL39482 | cds-NP_010628.3_MUCL39482 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005426.1:1031165-1032988:- | gene-YDR341C_MUCL42920 | rna-NM_001180649.3_MUCL42920 | cds-NP_010628.3_MUCL42920 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011813.1:1151726-1153549:- | gene-YDR341C_NCIM3186 | rna-NM_001180649.3_NCIM3186 | cds-NP_010628.3_NCIM3186 | 99.1 | 100.0 | Mismatch | 1 | 1 | 0 | False | False | True | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005266.1:1097129-1098952:- | gene-YDR341C_NCYC1407 | rna-NM_001180649.3_NCYC1407 | cds-NP_010628.3_NCYC1407 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994143.1:1108388-1110211:- | gene-YDR341C_PE2H3 | rna-NM_001180649.3_PE2H3 | cds-NP_010628.3_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:1113973-1115796:- | gene-YDR341C_PE2H4 | rna-NM_001180649.3_PE2H4 | cds-NP_010628.3_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:1151803-1153626:- | gene-YDR341C_S288C | rna-NM_001180649.3_S288C | cds-NP_010628.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000025.1:122610-124433:- | gene-YDR341C_SA1 | rna-NM_001180649.3_SA1 | cds-NP_010628.3_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005490.1:1108615-1110438:- | gene-YDR341C_ThermosaccDry | rna-NM_001180649.3_ThermosaccDry | cds-NP_010628.3_ThermosaccDry | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005458.1:1124783-1126606:- | gene-YDR341C_VR1 | rna-NM_001180649.3_VR1 | cds-NP_010628.3_VR1 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000008.1:152981-154804:- | gene-YDR341C_ZTW1 | rna-NM_001180649.3_ZTW1 | cds-NP_010628.3_ZTW1 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:1104213-1106036:- | gene-YDR341C_Sparadoxus | rna-NM_001180649.3_Sparadoxus | cds-NP_010628.3_Sparadoxus | 91.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |