Gene name: YDR261W-A
Reference locus (S288C): YDR261W-A
Gene biotype: protein_coding
Description: Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; Gag is a nucleocapsid protein that is the structural constituent of virus-like particles (VLPs); similar to retroviral Gag
Top 10 interactors (score): YDR261W-B (0.687)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001528.1:572931-574247:- | gene-YDR261W-A_CENPK1137D | rna-NM_001184422.3_CENPK1137D | cds-NP_058147.3_CENPK1137D | 90.8 | 100.0 | Mismatch | 1 | 1 | 0 | False | False | True | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011813.1:981385-982701:+ | gene-YDR261W-A_NCIM3186 | rna-NM_001184422.3_NCIM3186 | cds-NP_058147.3_NCIM3186 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994142.1:85456-86772:+ | gene-YDR261W-A_PE2H3 | rna-NM_001184422.3_PE2H3 | cds-NP_058147.3_PE2H3 | 98.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999874.1:85413-86729:+ | gene-YDR261W-A_PE2H4 | rna-NM_001184422.3_PE2H4 | cds-NP_058147.3_PE2H4 | 98.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:981462-982778:+ | gene-YDR261W-A_S288C | rna-NM_001184422.3_S288C | cds-NP_058147.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |