Gene name: YDR261C-C
Reference locus (S288C): YDR261C-C
Gene biotype: protein_coding
Description: Retrotransposon TYA Gag gene co-transcribed with TYB Pol; Gag processing produces capsid proteins; in YDRCTy1-3 TYB is mutant and probably non-functional
Top 10 interactors (score): SCH9 (0.483); SWI6 (0.42)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011813.1:990950-992272:- | gene-YDR261C-C_NCIM3186 | rna-NM_001184420.1_NCIM3186 | cds-NP_058149.1_NCIM3186 | 88.3 | 100.0 | Mismatch | 1 | 1 | 0 | False | False | True | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:991027-992349:- | gene-YDR261C-C_S288C | rna-NM_001184420.1_S288C | cds-NP_058149.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:1301048-1302370:+ | gene-YDR261C-C_Sparadoxus | rna-NM_001184420.1_Sparadoxus | cds-NP_058149.1_Sparadoxus | 97.6 | 99.7 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |