Gene name: YDR248C
Reference locus (S288C): YDR248C
Gene biotype: protein_coding
Description: Putative gluconokinase; sequence similarity to bacterial and human gluconokinase; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; upregulated by deletion of the RNAP-II associated factor, PAF1
Top 10 interactors (score): GND2 (0.994); GND1 (0.994); SOL3 (0.973); SOL4 (0.967); SOL1 (0.955); SOL2 (0.955); RKI1 (0.883); ZWF1 (0.761); PUT2 (0.748); RPE1 (0.725); MOD5 (0.703); DSK2 (0.651); PUT1 (0.643); YMR102C (0.637); SUV3 (0.623); CAB1 (0.619); XKS1 (0.615); YMR315W (0.614); NQM1 (0.613); ILV3 (0.606)
Homologues (species, bitscore): IDNK (Homo sapiens, 91.7); Idnk (Mus musculus, 79.7); idnk (Xenopus tropicalis, 85.9); F26D11.1 (Caenorhabditis elegans, 97.4); AT2G16790 (Arabidopsis thaliana, 84.3)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005298.1:914090-914671:- | gene-YDR248C_AKU4011 | rna-NM_001180556.1_AKU4011 | cds-NP_010534.1_AKU4011 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000080.1:210637-211218:+ | gene-YDR248C_BG1 | rna-NM_001180556.1_BG1 | cds-NP_010534.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005506.1:946418-946999:- | gene-YDR248C_Bruggeman | rna-NM_001180556.1_Bruggeman | cds-NP_010534.1_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005522.1:933701-934282:- | gene-YDR248C_CAT1 | rna-NM_001180556.1_CAT1 | cds-NP_010534.1_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005362.1:904439-905020:- | gene-YDR248C_CBS1585 | rna-NM_001180556.1_CBS1585 | cds-NP_010534.1_CBS1585 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005346.1:933995-934576:- | gene-YDR248C_CBS436 | rna-NM_001180556.1_CBS436 | cds-NP_010534.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005330.1:901199-901780:- | gene-YDR248C_CBS6412 | rna-NM_001180556.1_CBS6412 | cds-NP_010534.1_CBS6412 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005314.1:932293-932874:- | gene-YDR248C_CBS6413 | rna-NM_001180556.1_CBS6413 | cds-NP_010534.1_CBS6413 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001525.1:956684-957265:- | gene-YDR248C_CENPK1137D | rna-NM_001180556.1_CENPK1137D | cds-NP_010534.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005474.1:914758-915339:- | gene-YDR248C_EthanolRed | rna-NM_001180556.1_EthanolRed | cds-NP_010534.1_EthanolRed | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005538.1:922960-923541:- | gene-YDR248C_FaliES1 | rna-NM_001180556.1_FaliES1 | cds-NP_010534.1_FaliES1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000261.1:11491-12072:- | gene-YDR248C_JAY291 | rna-NM_001180556.1_JAY291 | cds-NP_010534.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005410.1:932316-932897:- | gene-YDR248C_MUCL30387 | rna-NM_001180556.1_MUCL30387 | cds-NP_010534.1_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005442.1:920346-920927:- | gene-YDR248C_MUCL30388 | rna-NM_001180556.1_MUCL30388 | cds-NP_010534.1_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005282.1:905844-906425:- | gene-YDR248C_MUCL39482 | rna-NM_001180556.1_MUCL39482 | cds-NP_010534.1_MUCL39482 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005426.1:845605-846186:- | gene-YDR248C_MUCL42920 | rna-NM_001180556.1_MUCL42920 | cds-NP_010534.1_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011813.1:957681-958262:- | gene-YDR248C_NCIM3186 | rna-NM_001180556.1_NCIM3186 | cds-NP_010534.1_NCIM3186 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005266.1:909513-910094:- | gene-YDR248C_NCYC1407 | rna-NM_001180556.1_NCYC1407 | cds-NP_010534.1_NCYC1407 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994143.1:925768-926349:- | gene-YDR248C_PE2H3 | rna-NM_001180556.1_PE2H3 | cds-NP_010534.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:931045-931626:- | gene-YDR248C_PE2H4 | rna-NM_001180556.1_PE2H4 | cds-NP_010534.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:957758-958339:- | gene-YDR248C_S288C | rna-NM_001180556.1_S288C | cds-NP_010534.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000013.1:163605-164186:- | gene-YDR248C_SA1 | rna-NM_001180556.1_SA1 | cds-NP_010534.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005490.1:921114-921695:- | gene-YDR248C_ThermosaccDry | rna-NM_001180556.1_ThermosaccDry | cds-NP_010534.1_ThermosaccDry | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005458.1:936368-936949:- | gene-YDR248C_VR1 | rna-NM_001180556.1_VR1 | cds-NP_010534.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000007.1:183859-184440:- | gene-YDR248C_ZTW1 | rna-NM_001180556.1_ZTW1 | cds-NP_010534.1_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:926513-927094:- | gene-YDR248C_Sparadoxus | rna-NM_001180556.1_Sparadoxus | cds-NP_010534.1_Sparadoxus | 90.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |