YDR210W-A (YDR210W-A)

Gene profile

Gene name: YDR210W-A
Reference locus (S288C): YDR210W-A
Gene biotype: protein_coding

Description: Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; Gag is a nucleocapsid protein that is the structural constituent of virus-like particles (VLPs); similar to retroviral Gag

Top 10 interactors (score): Unknown

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
BG1 GCA_001932575.1 Bioethanol South America MSHP01000036.1:223-1539:- gene-YDR210W-A_BG1 rna-NM_001184418.1_BG1 cds-NP_058143.1_BG1 99.3 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America MBWC01000340.1:1-1201:+ gene-YDR210W-A_CAT1 rna-NM_001184418.1_CAT1 cds-NP_058143.1_CAT1 90.7 91.1 Verified 1 1 0 False False True False False
CBS436 GCA_001738355.1 Sake Asia CM005345.1:85141-86457:+ gene-YDR210W-A_CBS436 rna-NM_001184418.1_CBS436 cds-NP_058143.1_CBS436 99.2 100.0 Mismatch 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011821.1:980067-981383:- gene-YDR210W-A_NCIM3186 rna-NM_001184418.1_NCIM3186 cds-NP_058143.1_NCIM3186 96.5 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994154.1:1022706-1024022:- gene-YDR210W-A_PE2H3 rna-NM_001184418.1_PE2H3 cds-NP_058143.1_PE2H3 99.8 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999886.1:1039057-1040373:- gene-YDR210W-A_PE2H4 rna-NM_001184418.1_PE2H4 cds-NP_058143.1_PE2H4 99.9 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001136.10:872112-873428:+ gene-YDR210W-A_S288C rna-NM_001184418.1_S288C cds-NP_058143.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
VR1 GCA_001738595.1 Bioethanol South America MBVZ01000290.1:206-1522:+ gene-YDR210W-A_VR1 rna-NM_001184418.1_VR1 cds-NP_058143.1_VR1 99.4 100.0 Verified 1 1 1 False True False False False

Additional files