Gene name: YDR210W-A
Reference locus (S288C): YDR210W-A
Gene biotype: protein_coding
Description: Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; Gag is a nucleocapsid protein that is the structural constituent of virus-like particles (VLPs); similar to retroviral Gag
Top 10 interactors (score): Unknown
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000036.1:223-1539:- | gene-YDR210W-A_BG1 | rna-NM_001184418.1_BG1 | cds-NP_058143.1_BG1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | MBWC01000340.1:1-1201:+ | gene-YDR210W-A_CAT1 | rna-NM_001184418.1_CAT1 | cds-NP_058143.1_CAT1 | 90.7 | 91.1 | Verified | 1 | 1 | 0 | False | False | True | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005345.1:85141-86457:+ | gene-YDR210W-A_CBS436 | rna-NM_001184418.1_CBS436 | cds-NP_058143.1_CBS436 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011821.1:980067-981383:- | gene-YDR210W-A_NCIM3186 | rna-NM_001184418.1_NCIM3186 | cds-NP_058143.1_NCIM3186 | 96.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994154.1:1022706-1024022:- | gene-YDR210W-A_PE2H3 | rna-NM_001184418.1_PE2H3 | cds-NP_058143.1_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999886.1:1039057-1040373:- | gene-YDR210W-A_PE2H4 | rna-NM_001184418.1_PE2H4 | cds-NP_058143.1_PE2H4 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:872112-873428:+ | gene-YDR210W-A_S288C | rna-NM_001184418.1_S288C | cds-NP_058143.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | MBVZ01000290.1:206-1522:+ | gene-YDR210W-A_VR1 | rna-NM_001184418.1_VR1 | cds-NP_058143.1_VR1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |