YDR210C-D (YDR210C-D)

Gene profile

Gene name: YDR210C-D
Reference locus (S288C): YDR210C-D
Gene biotype: protein_coding

Description: Transposon Ty1-DR3 Gag-Pol polyprotein; Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is processed to make a nucleocapsid-like protein (Gag), reverse transcriptase (RT), protease (PR), and integrase (IN); similar to retroviral genes

Top 10 interactors (score): Unknown

Homologues (species, bitscore): CRK8 (Arabidopsis thaliana, 94.4)

External links:
Saccharomyces genome database (SGD)
STRING database
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011813.1:878582-883850:- gene-YDR210C-D_NCIM3186 rna-NM_001184436.2_NCIM3186 cds-NP_620387.1_NCIM3186 98.9 100.0 Unannotated 1 1 0 False False False False True
PE2H3 GCA_905220325.1 Bioethanol South America HG994149.1:423416-428684:- gene-YDR210C-D_PE2H3 rna-NM_001184436.2_PE2H3 cds-NP_620387.1_PE2H3 96.2 99.9 Mismatch 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001136.10:878659-883927:- gene-YDR210C-D_S288C rna-NM_001184436.2_S288C cds-NP_620387.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False

Additional files