YDR210C-C (YDR210C-C)

Gene profile

Gene name: YDR210C-C
Reference locus (S288C): YDR210C-C
Gene biotype: protein_coding

Description: Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; Gag is a nucleocapsid protein that is the structural constituent of virus-like particles (VLPs); similar to retroviral Gag

Top 10 interactors (score): Unknown

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
BG1 GCA_001932575.1 Bioethanol South America MSHP01000190.1:94877-96199:+ gene-YDR210C-C_BG1 rna-NM_001184435.3_BG1 cds-NP_620388.3_BG1 60.7 100.0 Mismatch 1 1 0 False False False True False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011825.1:56731-58053:+ gene-YDR210C-C_NCIM3186 rna-NM_001184435.3_NCIM3186 cds-NP_620388.3_NCIM3186 71.2 100.0 Mismatch 1 1 0 False False True False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994149.1:427362-428684:- gene-YDR210C-C_PE2H3 rna-NM_001184435.3_PE2H3 cds-NP_620388.3_PE2H3 99.8 100.0 Mismatch 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001136.10:882605-883927:- gene-YDR210C-C_S288C rna-NM_001184435.3_S288C cds-NP_620388.3_S288C 100.0 100.0 Verified 1 1 1 True True False False False

Additional files