Gene name: YDR210C-C
Reference locus (S288C): YDR210C-C
Gene biotype: protein_coding
Description: Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; Gag is a nucleocapsid protein that is the structural constituent of virus-like particles (VLPs); similar to retroviral Gag
Top 10 interactors (score): Unknown
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000190.1:94877-96199:+ | gene-YDR210C-C_BG1 | rna-NM_001184435.3_BG1 | cds-NP_620388.3_BG1 | 60.7 | 100.0 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011825.1:56731-58053:+ | gene-YDR210C-C_NCIM3186 | rna-NM_001184435.3_NCIM3186 | cds-NP_620388.3_NCIM3186 | 71.2 | 100.0 | Mismatch | 1 | 1 | 0 | False | False | True | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994149.1:427362-428684:- | gene-YDR210C-C_PE2H3 | rna-NM_001184435.3_PE2H3 | cds-NP_620388.3_PE2H3 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:882605-883927:- | gene-YDR210C-C_S288C | rna-NM_001184435.3_S288C | cds-NP_620388.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |