Gene name: YDR098C-B
Reference locus (S288C): YDR098C-B
Gene biotype: protein_coding
Description: Transposon Ty1-DR1 Gag-Pol polyprotein; Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is processed to make a nucleocapsid-like protein (Gag), reverse transcriptase (RT), protease (PR), and integrase (IN); similar to retroviral genes
Top 10 interactors (score): YJR027W (0.988); YER138W-A (0.988); YDR261W-B (0.988); HAP1 (0.975); YOR192C-C (0.547); MAG1 (0.47); YGR109W-B (0.47)
Homologues (species, bitscore): CRK8 (Arabidopsis thaliana, 95.1)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| MUCL30388 | GCA_001738495.1 | Bread | Europe | MBVW01000233.1:1-641:- | gene-YDR098C-B_MUCL30388 | rna-NM_001184417.2_MUCL30388 | cds-NP_058140.1_MUCL30388 | 12.1 | 12.1 | Mismatch | 1 | 1 | 0 | False | False | True | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994143.1:1126513-1131781:+ | gene-YDR098C-B_PE2H3 | rna-NM_001184417.2_PE2H3 | cds-NP_058140.1_PE2H3 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:1132098-1137366:+ | gene-YDR098C-B_PE2H4 | rna-NM_001184417.2_PE2H4 | cds-NP_058140.1_PE2H4 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:645858-651126:- | gene-YDR098C-B_S288C | rna-NM_001184417.2_S288C | cds-NP_058140.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |