Gene name: YDR042C
Reference locus (S288C): YDR042C
Gene biotype: protein_coding
Description: Uncharacterized protein YDR042C; Putative protein of unknown function; expression is increased in ssu72-ts69 mutant
Top 10 interactors (score): CTO1 (0.752); HEM4 (0.716); TRS31 (0.569); ERG25 (0.48); YDR053W (0.47); RPS9B (0.453); NAB3 (0.45); CTA1 (0.45); HYR1 (0.439); DBF4 (0.433)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005298.1:518248-518850:- | gene-YDR042C_AKU4011 | rna-NM_001180350.3_AKU4011 | cds-NP_010327.3_AKU4011 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000102.1:36348-36950:+ | gene-YDR042C_BG1 | rna-NM_001180350.3_BG1 | cds-NP_010327.3_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005506.1:550606-551208:- | gene-YDR042C_Bruggeman | rna-NM_001180350.3_Bruggeman | cds-NP_010327.3_Bruggeman | 99.6 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | False | True |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005522.1:533605-534207:- | gene-YDR042C_CAT1 | rna-NM_001180350.3_CAT1 | cds-NP_010327.3_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005362.1:509205-509807:- | gene-YDR042C_CBS1585 | rna-NM_001180350.3_CBS1585 | cds-NP_010327.3_CBS1585 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005346.1:534378-534980:- | gene-YDR042C_CBS436 | rna-NM_001180350.3_CBS436 | cds-NP_010327.3_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005330.1:505616-506218:- | gene-YDR042C_CBS6412 | rna-NM_001180350.3_CBS6412 | cds-NP_010327.3_CBS6412 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005314.1:534284-534886:- | gene-YDR042C_CBS6413 | rna-NM_001180350.3_CBS6413 | cds-NP_010327.3_CBS6413 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001525.1:539691-540293:- | gene-YDR042C_CENPK1137D | rna-NM_001180350.3_CENPK1137D | cds-NP_010327.3_CENPK1137D | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005474.1:520172-520774:- | gene-YDR042C_EthanolRed | rna-NM_001180350.3_EthanolRed | cds-NP_010327.3_EthanolRed | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005538.1:526529-527131:- | gene-YDR042C_FaliES1 | rna-NM_001180350.3_FaliES1 | cds-NP_010327.3_FaliES1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000246.1:27589-28191:+ | gene-YDR042C_JAY291 | rna-NM_001180350.3_JAY291 | cds-NP_010327.3_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005410.1:535112-535714:- | gene-YDR042C_MUCL30387 | rna-NM_001180350.3_MUCL30387 | cds-NP_010327.3_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005442.1:525688-526290:- | gene-YDR042C_MUCL30388 | rna-NM_001180350.3_MUCL30388 | cds-NP_010327.3_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005282.1:510573-511175:- | gene-YDR042C_MUCL39482 | rna-NM_001180350.3_MUCL39482 | cds-NP_010327.3_MUCL39482 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005426.1:440807-441409:- | gene-YDR042C_MUCL42920 | rna-NM_001180350.3_MUCL42920 | cds-NP_010327.3_MUCL42920 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011813.1:540524-541126:- | gene-YDR042C_NCIM3186 | rna-NM_001180350.3_NCIM3186 | cds-NP_010327.3_NCIM3186 | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005266.1:509509-510111:- | gene-YDR042C_NCYC1407 | rna-NM_001180350.3_NCYC1407 | cds-NP_010327.3_NCYC1407 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994143.1:529145-529747:- | gene-YDR042C_PE2H3 | rna-NM_001180350.3_PE2H3 | cds-NP_010327.3_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:528450-529052:- | gene-YDR042C_PE2H4 | rna-NM_001180350.3_PE2H4 | cds-NP_010327.3_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:540601-541203:- | gene-YDR042C_S288C | rna-NM_001180350.3_S288C | cds-NP_010327.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000065.1:57916-58518:- | gene-YDR042C_SA1 | rna-NM_001180350.3_SA1 | cds-NP_010327.3_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005490.1:526007-526609:- | gene-YDR042C_ThermosaccDry | rna-NM_001180350.3_ThermosaccDry | cds-NP_010327.3_ThermosaccDry | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005458.1:538960-539562:- | gene-YDR042C_VR1 | rna-NM_001180350.3_VR1 | cds-NP_010327.3_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000006.1:523867-524469:- | gene-YDR042C_ZTW1 | rna-NM_001180350.3_ZTW1 | cds-NP_010327.3_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:528225-528806:- | gene-YDR042C_Sparadoxus | rna-NM_001180350.3_Sparadoxus | cds-NP_010327.3_Sparadoxus | 82.8 | 96.1 | Verified | 1 | 1 | 1 | False | True | False | False | False |