YDR034C-A (YDR034C-A)


Gene profile

Gene name: YDR034C-A
Reference locus (S288C): YDR034C-A
Gene biotype: protein_coding

Description: Putative uncharacterized protein ydr034c-a; Putative protein of unknown function; contained within the solo Ty1 LTR element YDRWdelta7

Top 10 interactors (score): YOL106W (0.872); YCR018C-A (0.872); YER138W-A (0.838); YMR158C-A (0.593)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
BG1 GCA_001932575.1 Bioethanol South America MSHP01000102.1:49566-49742:+ gene-YDR034C-A_BG1 rna-NM_001184326.1_BG1 cds-NP_010318.1_BG1 100.0 100.0 Verified 1 1 1 True True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005506.1:529429-529605:- gene-YDR034C-A_Bruggeman rna-NM_001184326.1_Bruggeman cds-NP_010318.1_Bruggeman 98.8 100.0 Mismatch 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005522.1:516608-516784:- gene-YDR034C-A_CAT1 rna-NM_001184326.1_CAT1 cds-NP_010318.1_CAT1 100.0 100.0 Verified 1 1 1 True True False False False
CBS436 GCA_001738355.1 Sake Asia CM005346.1:514044-514220:- gene-YDR034C-A_CBS436 rna-NM_001184326.1_CBS436 cds-NP_010318.1_CBS436 100.0 100.0 Mismatch 1 1 1 True True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001537.1:211498-211677:- gene-YDR034C-A_CENPK1137D rna-NM_001184326.1_CENPK1137D cds-NP_010318.1_CENPK1137D 84.1 94.9 Unannotated 1 1 0 False False True False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000101.1:1-64:- gene-YDR034C-A_JAY291 rna-NM_001184326.1_JAY291 cds-NP_010318.1_JAY291 36.1 36.1 Mismatch 1 1 0 False False False True False
MUCL30387 GCA_001738515.1 Bread Europe CM005410.1:514292-514468:- gene-YDR034C-A_MUCL30387 rna-NM_001184326.1_MUCL30387 cds-NP_010318.1_MUCL30387 99.4 100.0 Verified 1 1 1 True True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005442.1:505614-505790:- gene-YDR034C-A_MUCL30388 rna-NM_001184326.1_MUCL30388 cds-NP_010318.1_MUCL30388 98.3 100.0 Mismatch 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005426.1:420698-420874:- gene-YDR034C-A_MUCL42920 rna-NM_001184326.1_MUCL42920 cds-NP_010318.1_MUCL42920 100.0 100.0 Verified 1 1 1 True True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994143.1:512955-513131:- gene-YDR034C-A_PE2H3 rna-NM_001184326.1_PE2H3 cds-NP_010318.1_PE2H3 100.0 100.0 Verified 1 1 1 True True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999875.1:512260-512436:- gene-YDR034C-A_PE2H4 rna-NM_001184326.1_PE2H4 cds-NP_010318.1_PE2H4 100.0 100.0 Verified 1 1 1 True True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001136.10:520516-520692:- gene-YDR034C-A_S288C rna-NM_001184326.1_S288C cds-NP_010318.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000065.1:41728-41904:- gene-YDR034C-A_SA1 rna-NM_001184326.1_SA1 cds-NP_010318.1_SA1 100.0 100.0 Verified 1 1 1 True True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005458.1:518891-519067:- gene-YDR034C-A_VR1 rna-NM_001184326.1_VR1 cds-NP_010318.1_VR1 100.0 100.0 Verified 1 1 1 True True False False False

Additional files