YDL241W (YDL241W)


Gene profile

Gene name: YDL241W
Reference locus (S288C): YDL241W
Gene biotype: protein_coding

Description: Uncharacterized protein YDL241W; Putative protein of unknown function; SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum; YDL241W is not an essential gene

Top 10 interactors (score): FMP32 (0.789); SOR2 (0.674); YJR096W (0.65); CSM4 (0.61); SOR1 (0.572); GPD2 (0.451); GCY1 (0.45); YSY6 (0.45); UTP25 (0.402)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005298.1:3818-4189:+ gene-YDL241W_AKU4011 rna-NM_001180301.1_AKU4011 cds-NP_010040.1_AKU4011 97.3 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000077.1:62341-62711:- gene-YDL241W_BG1 rna-NM_001180301.1_BG1 cds-NP_010040.1_BG1 99.1 99.7 Unannotated 1 1 0 False False False True False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005506.1:18835-19206:+ gene-YDL241W_Bruggeman rna-NM_001180301.1_Bruggeman cds-NP_010040.1_Bruggeman 97.5 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005522.1:21882-22253:+ gene-YDL241W_CAT1 rna-NM_001180301.1_CAT1 cds-NP_010040.1_CAT1 100.0 100.0 Verified 1 1 1 True True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005362.1:3190-3561:+ gene-YDL241W_CBS1585 rna-NM_001180301.1_CBS1585 cds-NP_010040.1_CBS1585 98.1 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005346.1:19881-20252:+ gene-YDL241W_CBS436 rna-NM_001180301.1_CBS436 cds-NP_010040.1_CBS436 99.7 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005330.1:3639-4010:+ gene-YDL241W_CBS6412 rna-NM_001180301.1_CBS6412 cds-NP_010040.1_CBS6412 98.1 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005314.1:20578-20949:+ gene-YDL241W_CBS6413 rna-NM_001180301.1_CBS6413 cds-NP_010040.1_CBS6413 98.1 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001525.1:19603-19974:+ gene-YDL241W_CENPK1137D rna-NM_001180301.1_CENPK1137D cds-NP_010040.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005474.1:17343-17714:+ gene-YDL241W_EthanolRed rna-NM_001180301.1_EthanolRed cds-NP_010040.1_EthanolRed 97.5 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005538.1:20645-21016:+ gene-YDL241W_FaliES1 rna-NM_001180301.1_FaliES1 cds-NP_010040.1_FaliES1 97.5 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000011.1:23519-23889:- gene-YDL241W_JAY291 rna-NM_001180301.1_JAY291 cds-NP_010040.1_JAY291 99.1 99.7 Unannotated 1 1 0 False False False True False
MUCL30387 GCA_001738515.1 Bread Europe CM005410.1:18759-19130:+ gene-YDL241W_MUCL30387 rna-NM_001180301.1_MUCL30387 cds-NP_010040.1_MUCL30387 97.5 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005442.1:8326-8697:+ gene-YDL241W_MUCL30388 rna-NM_001180301.1_MUCL30388 cds-NP_010040.1_MUCL30388 97.5 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005282.1:3786-4157:+ gene-YDL241W_MUCL39482 rna-NM_001180301.1_MUCL39482 cds-NP_010040.1_MUCL39482 98.1 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005426.1:18710-19081:+ gene-YDL241W_MUCL42920 rna-NM_001180301.1_MUCL42920 cds-NP_010040.1_MUCL42920 97.5 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011813.1:20558-20929:+ gene-YDL241W_NCIM3186 rna-NM_001180301.1_NCIM3186 cds-NP_010040.1_NCIM3186 97.3 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005266.1:3743-4114:+ gene-YDL241W_NCYC1407 rna-NM_001180301.1_NCYC1407 cds-NP_010040.1_NCYC1407 98.1 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994143.1:10961-11331:+ gene-YDL241W_PE2H3 rna-NM_001180301.1_PE2H3 cds-NP_010040.1_PE2H3 99.1 99.7 Unannotated 1 1 0 False False False True False
PE2H4 GCA_905220315.1 Bioethanol South America LR999875.1:10961-11331:+ gene-YDL241W_PE2H4 rna-NM_001180301.1_PE2H4 cds-NP_010040.1_PE2H4 99.1 99.7 Unannotated 1 1 0 False False False True False
S288C GCF_000146045.2 Laboratory Not applicable NC_001136.10:20635-21006:+ gene-YDL241W_S288C rna-NM_001180301.1_S288C cds-NP_010040.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000107.1:23296-23667:- gene-YDL241W_SA1 rna-NM_001180301.1_SA1 cds-NP_010040.1_SA1 98.3 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005490.1:20773-21144:+ gene-YDL241W_ThermosaccDry rna-NM_001180301.1_ThermosaccDry cds-NP_010040.1_ThermosaccDry 97.5 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005458.1:20697-21068:+ gene-YDL241W_VR1 rna-NM_001180301.1_VR1 cds-NP_010040.1_VR1 98.3 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000006.1:19834-20205:+ gene-YDL241W_ZTW1 rna-NM_001180301.1_ZTW1 cds-NP_010040.1_ZTW1 97.5 100.0 Verified 1 1 1 False True False False False

Additional files