YDL206W (YDL206W)


Gene profile

Gene name: YDL206W
Reference locus (S288C): YDL206W
Gene biotype: protein_coding

Description: Solute carrier family 24 (sodium/potassium/calcium exchanger), member 6; Putative protein of unknown function; YDL206W is not an essential protein

Top 10 interactors (score): VNX1 (0.77); NHX1 (0.742); NHA1 (0.7); CCH1 (0.588); VCX1 (0.486); FMP32 (0.485); GPI16 (0.479); PUF3 (0.469); RPT1 (0.465); FRQ1 (0.426); ASA1 (0.403)

Homologues (species, bitscore): SLC8B1 (Homo sapiens, 64.3); Slc8b1 (Mus musculus, 68.2); slc24a3 (Danio rerio, 67.4); slc8b1 (Xenopus tropicalis, 79.0); CG13223 (Drosophila melanogaster, 50.4); ncx-7 (Caenorhabditis elegans, 67.4); CAX11 (Arabidopsis thaliana, 72.4)

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005298.1:73663-75951:+ gene-YDL206W_AKU4011 rna-NM_001180266.1_AKU4011 cds-NP_010075.1_AKU4011 99.3 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000101.1:6837-9125:+ gene-YDL206W_BG1 rna-NM_001180266.1_BG1 cds-NP_010075.1_BG1 99.4 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005506.1:90054-92342:+ gene-YDL206W_Bruggeman rna-NM_001180266.1_Bruggeman cds-NP_010075.1_Bruggeman 99.4 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005522.1:92165-94453:+ gene-YDL206W_CAT1 rna-NM_001180266.1_CAT1 cds-NP_010075.1_CAT1 99.4 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005362.1:72515-74803:+ gene-YDL206W_CBS1585 rna-NM_001180266.1_CBS1585 cds-NP_010075.1_CBS1585 99.3 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005356.1:287418-289706:+ gene-YDL206W_CBS436 rna-NM_001180266.1_CBS436 cds-NP_010075.1_CBS436 99.3 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005330.1:72627-74915:+ gene-YDL206W_CBS6412 rna-NM_001180266.1_CBS6412 cds-NP_010075.1_CBS6412 99.3 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005314.1:90173-92461:+ gene-YDL206W_CBS6413 rna-NM_001180266.1_CBS6413 cds-NP_010075.1_CBS6413 99.2 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001525.1:88842-91130:+ gene-YDL206W_CENPK1137D rna-NM_001180266.1_CENPK1137D cds-NP_010075.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005474.1:86311-88599:+ gene-YDL206W_EthanolRed rna-NM_001180266.1_EthanolRed cds-NP_010075.1_EthanolRed 99.3 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005538.1:90916-93204:+ gene-YDL206W_FaliES1 rna-NM_001180266.1_FaliES1 cds-NP_010075.1_FaliES1 99.3 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000344.1:26048-28336:- gene-YDL206W_JAY291 rna-NM_001180266.1_JAY291 cds-NP_010075.1_JAY291 99.3 100.0 Verified 1 1 1 False True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005410.1:88286-90574:+ gene-YDL206W_MUCL30387 rna-NM_001180266.1_MUCL30387 cds-NP_010075.1_MUCL30387 99.3 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005442.1:77858-80146:+ gene-YDL206W_MUCL30388 rna-NM_001180266.1_MUCL30388 cds-NP_010075.1_MUCL30388 99.3 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005282.1:73358-75646:+ gene-YDL206W_MUCL39482 rna-NM_001180266.1_MUCL39482 cds-NP_010075.1_MUCL39482 99.3 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005426.1:89437-91725:+ gene-YDL206W_MUCL42920 rna-NM_001180266.1_MUCL42920 cds-NP_010075.1_MUCL42920 99.3 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011813.1:90099-92387:+ gene-YDL206W_NCIM3186 rna-NM_001180266.1_NCIM3186 cds-NP_010075.1_NCIM3186 99.0 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005266.1:73314-75602:+ gene-YDL206W_NCYC1407 rna-NM_001180266.1_NCYC1407 cds-NP_010075.1_NCYC1407 99.5 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994143.1:81057-83345:+ gene-YDL206W_PE2H3 rna-NM_001180266.1_PE2H3 cds-NP_010075.1_PE2H3 99.3 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999875.1:81067-83355:+ gene-YDL206W_PE2H4 rna-NM_001180266.1_PE2H4 cds-NP_010075.1_PE2H4 99.3 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001136.10:90176-92464:+ gene-YDL206W_S288C rna-NM_001180266.1_S288C cds-NP_010075.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000126.1:6747-9035:+ gene-YDL206W_SA1 rna-NM_001180266.1_SA1 cds-NP_010075.1_SA1 99.3 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005490.1:90680-92968:+ gene-YDL206W_ThermosaccDry rna-NM_001180266.1_ThermosaccDry cds-NP_010075.1_ThermosaccDry 99.3 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005458.1:91632-93920:+ gene-YDL206W_VR1 rna-NM_001180266.1_VR1 cds-NP_010075.1_VR1 99.3 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000006.1:89359-91647:+ gene-YDL206W_ZTW1 rna-NM_001180266.1_ZTW1 cds-NP_010075.1_ZTW1 99.4 100.0 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047490.1:92710-94995:+ gene-YDL206W_Sparadoxus rna-NM_001180266.1_Sparadoxus cds-NP_010075.1_Sparadoxus 88.8 99.7 Verified 1 1 1 False True False False False

Additional files