YDL180W (YDL180W)

Gene profile

Gene name: YDL180W
Reference locus (S288C): YDL180W
Gene biotype: protein_coding

Description: Uncharacterized membrane protein YDL180W; Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the vacuole

Top 10 interactors (score): EST1 (0.428)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005298.1:120391-122034:+ gene-YDL180W_AKU4011 rna-NM_001180240.1_AKU4011 cds-NP_010101.1_AKU4011 99.5 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000102.1:427675-429318:- gene-YDL180W_BG1 rna-NM_001180240.1_BG1 cds-NP_010101.1_BG1 99.3 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005506.1:136445-138088:+ gene-YDL180W_Bruggeman rna-NM_001180240.1_Bruggeman cds-NP_010101.1_Bruggeman 99.6 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005522.1:134773-136416:+ gene-YDL180W_CAT1 rna-NM_001180240.1_CAT1 cds-NP_010101.1_CAT1 99.6 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005362.1:118429-120072:+ gene-YDL180W_CBS1585 rna-NM_001180240.1_CBS1585 cds-NP_010101.1_CBS1585 99.6 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005346.1:135390-137033:+ gene-YDL180W_CBS436 rna-NM_001180240.1_CBS436 cds-NP_010101.1_CBS436 99.3 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005330.1:117992-119635:+ gene-YDL180W_CBS6412 rna-NM_001180240.1_CBS6412 cds-NP_010101.1_CBS6412 99.6 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005314.1:136803-138446:+ gene-YDL180W_CBS6413 rna-NM_001180240.1_CBS6413 cds-NP_010101.1_CBS6413 99.6 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001525.1:134569-136212:+ gene-YDL180W_CENPK1137D rna-NM_001180240.1_CENPK1137D cds-NP_010101.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005474.1:131811-133454:+ gene-YDL180W_EthanolRed rna-NM_001180240.1_EthanolRed cds-NP_010101.1_EthanolRed 99.7 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005538.1:137137-138780:+ gene-YDL180W_FaliES1 rna-NM_001180240.1_FaliES1 cds-NP_010101.1_FaliES1 99.7 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000032.1:80729-82372:- gene-YDL180W_JAY291 rna-NM_001180240.1_JAY291 cds-NP_010101.1_JAY291 99.3 100.0 Verified 1 1 1 False True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005410.1:134751-136394:+ gene-YDL180W_MUCL30387 rna-NM_001180240.1_MUCL30387 cds-NP_010101.1_MUCL30387 99.5 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005442.1:126396-128039:+ gene-YDL180W_MUCL30388 rna-NM_001180240.1_MUCL30388 cds-NP_010101.1_MUCL30388 99.5 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005282.1:119571-121214:+ gene-YDL180W_MUCL39482 rna-NM_001180240.1_MUCL39482 cds-NP_010101.1_MUCL39482 99.5 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe MBVV01000307.1:48155-49798:- gene-YDL180W_MUCL42920 rna-NM_001180240.1_MUCL42920 cds-NP_010101.1_MUCL42920 99.5 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011813.1:135819-137462:+ gene-YDL180W_NCIM3186 rna-NM_001180240.1_NCIM3186 cds-NP_010101.1_NCIM3186 99.4 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005266.1:119460-121103:+ gene-YDL180W_NCYC1407 rna-NM_001180240.1_NCYC1407 cds-NP_010101.1_NCYC1407 99.6 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994143.1:126771-128414:+ gene-YDL180W_PE2H3 rna-NM_001180240.1_PE2H3 cds-NP_010101.1_PE2H3 99.3 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999875.1:126775-128418:+ gene-YDL180W_PE2H4 rna-NM_001180240.1_PE2H4 cds-NP_010101.1_PE2H4 99.3 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001136.10:135896-137539:+ gene-YDL180W_S288C rna-NM_001180240.1_S288C cds-NP_010101.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000043.1:1548-3191:+ gene-YDL180W_SA1 rna-NM_001180240.1_SA1 cds-NP_010101.1_SA1 99.4 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005490.1:136897-138540:+ gene-YDL180W_ThermosaccDry rna-NM_001180240.1_ThermosaccDry cds-NP_010101.1_ThermosaccDry 99.7 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005458.1:137542-139185:+ gene-YDL180W_VR1 rna-NM_001180240.1_VR1 cds-NP_010101.1_VR1 99.3 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000006.1:135070-136713:+ gene-YDL180W_ZTW1 rna-NM_001180240.1_ZTW1 cds-NP_010101.1_ZTW1 99.7 100.0 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047490.1:137246-138889:+ gene-YDL180W_Sparadoxus rna-NM_001180240.1_Sparadoxus cds-NP_010101.1_Sparadoxus 90.7 99.9 Verified 1 1 1 False True False False False

Additional files