YDL177C (YDL177C)


Gene profile

Gene name: YDL177C
Reference locus (S288C): YDL177C
Gene biotype: protein_coding

Description: IMPACT family member YDL177C; Putative protein of unknown function; similar to the mouse IMPACT gene; YDL177C is not an essential gene

Top 10 interactors (score): YAR047C (0.945); ADH6 (0.848); YMR317W (0.767); GCN2 (0.607); MSK1 (0.528); KRS1 (0.528); MSD1 (0.501)

Homologues (species, bitscore): IMPACT (Homo sapiens, 80.5); Impact (Mus musculus, 79.7); impact (Xenopus tropicalis, 78.2); impt-1 (Caenorhabditis elegans, 77.8)

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005298.1:125635-126147:- gene-YDL177C_AKU4011 rna-NM_001180237.1_AKU4011 cds-NP_010104.1_AKU4011 100.0 100.0 Verified 1 1 1 True True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000102.1:423562-424074:+ gene-YDL177C_BG1 rna-NM_001180237.1_BG1 cds-NP_010104.1_BG1 99.0 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005506.1:141689-142201:- gene-YDL177C_Bruggeman rna-NM_001180237.1_Bruggeman cds-NP_010104.1_Bruggeman 100.0 100.0 Verified 1 1 1 True True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005522.1:140016-140528:- gene-YDL177C_CAT1 rna-NM_001180237.1_CAT1 cds-NP_010104.1_CAT1 100.0 100.0 Verified 1 1 1 True True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005362.1:123673-124185:- gene-YDL177C_CBS1585 rna-NM_001180237.1_CBS1585 cds-NP_010104.1_CBS1585 100.0 100.0 Verified 1 1 1 True True False False False
CBS436 GCA_001738355.1 Sake Asia CM005346.1:140634-141146:- gene-YDL177C_CBS436 rna-NM_001180237.1_CBS436 cds-NP_010104.1_CBS436 99.0 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005330.1:123236-123748:- gene-YDL177C_CBS6412 rna-NM_001180237.1_CBS6412 cds-NP_010104.1_CBS6412 100.0 100.0 Mismatch 1 1 1 True True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005314.1:142047-142559:- gene-YDL177C_CBS6413 rna-NM_001180237.1_CBS6413 cds-NP_010104.1_CBS6413 100.0 100.0 Verified 1 1 1 True True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001525.1:139882-140394:- gene-YDL177C_CENPK1137D rna-NM_001180237.1_CENPK1137D cds-NP_010104.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005474.1:137055-137567:- gene-YDL177C_EthanolRed rna-NM_001180237.1_EthanolRed cds-NP_010104.1_EthanolRed 99.8 100.0 Verified 1 1 1 True True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005538.1:142381-142893:- gene-YDL177C_FaliES1 rna-NM_001180237.1_FaliES1 cds-NP_010104.1_FaliES1 99.8 100.0 Verified 1 1 1 True True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000032.1:76616-77128:+ gene-YDL177C_JAY291 rna-NM_001180237.1_JAY291 cds-NP_010104.1_JAY291 99.0 100.0 Verified 1 1 1 False True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005410.1:139995-140507:- gene-YDL177C_MUCL30387 rna-NM_001180237.1_MUCL30387 cds-NP_010104.1_MUCL30387 99.4 100.0 Verified 1 1 1 True True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005442.1:131640-132152:- gene-YDL177C_MUCL30388 rna-NM_001180237.1_MUCL30388 cds-NP_010104.1_MUCL30388 99.4 100.0 Verified 1 1 1 True True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005282.1:124815-125327:- gene-YDL177C_MUCL39482 rna-NM_001180237.1_MUCL39482 cds-NP_010104.1_MUCL39482 100.0 100.0 Verified 1 1 1 True True False False False
MUCL42920 GCA_001738485.1 Bread Europe MBVV01000307.1:44042-44554:+ gene-YDL177C_MUCL42920 rna-NM_001180237.1_MUCL42920 cds-NP_010104.1_MUCL42920 100.0 100.0 Verified 1 1 1 True True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011813.1:141132-141644:- gene-YDL177C_NCIM3186 rna-NM_001180237.1_NCIM3186 cds-NP_010104.1_NCIM3186 100.0 100.0 Verified 1 1 1 True True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005266.1:124704-125216:- gene-YDL177C_NCYC1407 rna-NM_001180237.1_NCYC1407 cds-NP_010104.1_NCYC1407 100.0 100.0 Verified 1 1 1 True True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994143.1:132015-132527:- gene-YDL177C_PE2H3 rna-NM_001180237.1_PE2H3 cds-NP_010104.1_PE2H3 99.0 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999875.1:132019-132531:- gene-YDL177C_PE2H4 rna-NM_001180237.1_PE2H4 cds-NP_010104.1_PE2H4 99.0 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001136.10:141209-141721:- gene-YDL177C_S288C rna-NM_001180237.1_S288C cds-NP_010104.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000043.1:6792-7304:- gene-YDL177C_SA1 rna-NM_001180237.1_SA1 cds-NP_010104.1_SA1 99.0 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005490.1:142141-142653:- gene-YDL177C_ThermosaccDry rna-NM_001180237.1_ThermosaccDry cds-NP_010104.1_ThermosaccDry 99.8 100.0 Verified 1 1 1 True True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005458.1:142786-143298:- gene-YDL177C_VR1 rna-NM_001180237.1_VR1 cds-NP_010104.1_VR1 99.0 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000006.1:140314-140826:- gene-YDL177C_ZTW1 rna-NM_001180237.1_ZTW1 cds-NP_010104.1_ZTW1 100.0 100.0 Verified 1 1 1 True True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047490.1:142543-143055:- gene-YDL177C_Sparadoxus rna-NM_001180237.1_Sparadoxus cds-NP_010104.1_Sparadoxus 89.6 100.0 Verified 1 1 1 False True False False False

Additional files