Gene name: YDL109C
Reference locus (S288C): YDL109C
Gene biotype: protein_coding
Description: Putative lipase; involved in lipid metabolism; not an essential gene; YDL109C has a paralog, ROG1, that arose from the whole genome duplication
Top 10 interactors (score): ERP3 (0.713); YDR132C (0.696); YGL242C (0.696); YCR101C (0.692); MPO1 (0.692); DSD1 (0.676); POF1 (0.674); YLR108C (0.659); VPS55 (0.653); OCA5 (0.621); OCA1 (0.617); RDS1 (0.615); TDA5 (0.612); BNS1 (0.592); AIM23 (0.575); OCA2 (0.574); PAU23 (0.573); ATE1 (0.573); YKR104W (0.573); PFF1 (0.572)
Homologues (species, bitscore): FAM135B (Homo sapiens, 55.5); Fam135b (Mus musculus, 56.2); AT4G25770 (Arabidopsis thaliana, 79.3)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005298.1:249883-251826:- | gene-YDL109C_AKU4011 | rna-NM_001180168.1_AKU4011 | cds-NP_010174.1_AKU4011 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000102.1:298125-300068:+ | gene-YDL109C_BG1 | rna-NM_001180168.1_BG1 | cds-NP_010174.1_BG1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005506.1:267294-269237:- | gene-YDL109C_Bruggeman | rna-NM_001180168.1_Bruggeman | cds-NP_010174.1_Bruggeman | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005522.1:264034-265977:- | gene-YDL109C_CAT1 | rna-NM_001180168.1_CAT1 | cds-NP_010174.1_CAT1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005362.1:248143-250086:- | gene-YDL109C_CBS1585 | rna-NM_001180168.1_CBS1585 | cds-NP_010174.1_CBS1585 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005346.1:264803-266746:- | gene-YDL109C_CBS436 | rna-NM_001180168.1_CBS436 | cds-NP_010174.1_CBS436 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005330.1:246569-248512:- | gene-YDL109C_CBS6412 | rna-NM_001180168.1_CBS6412 | cds-NP_010174.1_CBS6412 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005314.1:266304-268247:- | gene-YDL109C_CBS6413 | rna-NM_001180168.1_CBS6413 | cds-NP_010174.1_CBS6413 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001525.1:264030-265973:- | gene-YDL109C_CENPK1137D | rna-NM_001180168.1_CENPK1137D | cds-NP_010174.1_CENPK1137D | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005474.1:260910-262853:- | gene-YDL109C_EthanolRed | rna-NM_001180168.1_EthanolRed | cds-NP_010174.1_EthanolRed | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005538.1:266880-268823:- | gene-YDL109C_FaliES1 | rna-NM_001180168.1_FaliES1 | cds-NP_010174.1_FaliES1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000010.1:36923-38866:- | gene-YDL109C_JAY291 | rna-NM_001180168.1_JAY291 | cds-NP_010174.1_JAY291 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005410.1:265081-267024:- | gene-YDL109C_MUCL30387 | rna-NM_001180168.1_MUCL30387 | cds-NP_010174.1_MUCL30387 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005442.1:255839-257782:- | gene-YDL109C_MUCL30388 | rna-NM_001180168.1_MUCL30388 | cds-NP_010174.1_MUCL30388 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005282.1:249249-251192:- | gene-YDL109C_MUCL39482 | rna-NM_001180168.1_MUCL39482 | cds-NP_010174.1_MUCL39482 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005426.1:171033-172976:- | gene-YDL109C_MUCL42920 | rna-NM_001180168.1_MUCL42920 | cds-NP_010174.1_MUCL42920 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011813.1:265181-267124:- | gene-YDL109C_NCIM3186 | rna-NM_001180168.1_NCIM3186 | cds-NP_010174.1_NCIM3186 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005266.1:249277-251220:- | gene-YDL109C_NCYC1407 | rna-NM_001180168.1_NCYC1407 | cds-NP_010174.1_NCYC1407 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994143.1:256034-257977:- | gene-YDL109C_PE2H3 | rna-NM_001180168.1_PE2H3 | cds-NP_010174.1_PE2H3 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:256038-257981:- | gene-YDL109C_PE2H4 | rna-NM_001180168.1_PE2H4 | cds-NP_010174.1_PE2H4 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:265258-267201:- | gene-YDL109C_S288C | rna-NM_001180168.1_S288C | cds-NP_010174.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000010.1:167713-169653:+ | gene-YDL109C_SA1 | rna-NM_001180168.1_SA1 | cds-NP_010174.1_SA1 | 98.8 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005490.1:266391-268334:- | gene-YDL109C_ThermosaccDry | rna-NM_001180168.1_ThermosaccDry | cds-NP_010174.1_ThermosaccDry | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005458.1:268496-270439:- | gene-YDL109C_VR1 | rna-NM_001180168.1_VR1 | cds-NP_010174.1_VR1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000006.1:264317-266259:- | gene-YDL109C_ZTW1 | rna-NM_001180168.1_ZTW1 | cds-NP_010174.1_ZTW1 | 99.3 | 99.9 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:266475-268418:- | gene-YDL109C_Sparadoxus | rna-NM_001180168.1_Sparadoxus | cds-NP_010174.1_Sparadoxus | 87.5 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |