YDL086W (YDL086W)


Gene profile

Gene name: YDL086W
Reference locus (S288C): YDL086W
Gene biotype: protein_coding

Description: Putative carboxymethylenebutenolidase; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; YDL086W is not an essential gene; Belongs to the dienelactone hydrolase family

Top 10 interactors (score): NNR2 (0.845); OXP1 (0.814); BFR1 (0.799); ARA2 (0.786); ECM14 (0.749); AIM2 (0.745); TIF34 (0.726); RPL34B (0.715); BNA1 (0.713); RPL16A (0.696); RPS11A (0.694); PAD1 (0.69); RPL25 (0.689); ERG4 (0.668); RPL13A (0.617); YDL144C (0.593); WSS1 (0.585); LUC7 (0.575); NDE2 (0.559); ASM4 (0.524)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005298.1:286027-286848:+ gene-YDL086W_AKU4011 rna-NM_001180145.1_AKU4011 cds-NP_010197.1_AKU4011 100.0 100.0 Verified 1 1 1 True True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000102.1:263096-263917:- gene-YDL086W_BG1 rna-NM_001180145.1_BG1 cds-NP_010197.1_BG1 99.6 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005506.1:303698-304519:+ gene-YDL086W_Bruggeman rna-NM_001180145.1_Bruggeman cds-NP_010197.1_Bruggeman 99.6 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005522.1:300189-301010:+ gene-YDL086W_CAT1 rna-NM_001180145.1_CAT1 cds-NP_010197.1_CAT1 99.6 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005362.1:284299-285120:+ gene-YDL086W_CBS1585 rna-NM_001180145.1_CBS1585 cds-NP_010197.1_CBS1585 100.0 100.0 Verified 1 1 1 True True False False False
CBS436 GCA_001738355.1 Sake Asia CM005346.1:300967-301788:+ gene-YDL086W_CBS436 rna-NM_001180145.1_CBS436 cds-NP_010197.1_CBS436 99.6 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005330.1:282727-283548:+ gene-YDL086W_CBS6412 rna-NM_001180145.1_CBS6412 cds-NP_010197.1_CBS6412 100.0 100.0 Mismatch 1 1 1 True True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005314.1:302352-303173:+ gene-YDL086W_CBS6413 rna-NM_001180145.1_CBS6413 cds-NP_010197.1_CBS6413 100.0 100.0 Verified 1 1 1 True True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001525.1:300236-301057:+ gene-YDL086W_CENPK1137D rna-NM_001180145.1_CENPK1137D cds-NP_010197.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005474.1:297062-297883:+ gene-YDL086W_EthanolRed rna-NM_001180145.1_EthanolRed cds-NP_010197.1_EthanolRed 100.0 100.0 Verified 1 1 1 True True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005538.1:303034-303855:+ gene-YDL086W_FaliES1 rna-NM_001180145.1_FaliES1 cds-NP_010197.1_FaliES1 100.0 100.0 Verified 1 1 1 True True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000010.1:73087-73908:+ gene-YDL086W_JAY291 rna-NM_001180145.1_JAY291 cds-NP_010197.1_JAY291 99.5 100.0 Verified 1 1 1 False True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005410.1:301214-302035:+ gene-YDL086W_MUCL30387 rna-NM_001180145.1_MUCL30387 cds-NP_010197.1_MUCL30387 99.6 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005442.1:292238-293059:+ gene-YDL086W_MUCL30388 rna-NM_001180145.1_MUCL30388 cds-NP_010197.1_MUCL30388 99.5 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005282.1:285404-286225:+ gene-YDL086W_MUCL39482 rna-NM_001180145.1_MUCL39482 cds-NP_010197.1_MUCL39482 100.0 100.0 Verified 1 1 1 True True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005426.1:207416-208237:+ gene-YDL086W_MUCL42920 rna-NM_001180145.1_MUCL42920 cds-NP_010197.1_MUCL42920 99.6 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011813.1:301336-302157:+ gene-YDL086W_NCIM3186 rna-NM_001180145.1_NCIM3186 cds-NP_010197.1_NCIM3186 99.5 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005266.1:285419-286240:+ gene-YDL086W_NCYC1407 rna-NM_001180145.1_NCYC1407 cds-NP_010197.1_NCYC1407 100.0 100.0 Verified 1 1 1 True True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994143.1:292205-293026:+ gene-YDL086W_PE2H3 rna-NM_001180145.1_PE2H3 cds-NP_010197.1_PE2H3 99.5 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999875.1:292202-293023:+ gene-YDL086W_PE2H4 rna-NM_001180145.1_PE2H4 cds-NP_010197.1_PE2H4 99.5 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001136.10:301413-302234:+ gene-YDL086W_S288C rna-NM_001180145.1_S288C cds-NP_010197.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000010.1:132686-133507:- gene-YDL086W_SA1 rna-NM_001180145.1_SA1 cds-NP_010197.1_SA1 99.5 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005490.1:302545-303366:+ gene-YDL086W_ThermosaccDry rna-NM_001180145.1_ThermosaccDry cds-NP_010197.1_ThermosaccDry 100.0 100.0 Verified 1 1 1 True True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005458.1:304620-305441:+ gene-YDL086W_VR1 rna-NM_001180145.1_VR1 cds-NP_010197.1_VR1 99.6 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000006.1:300462-301283:+ gene-YDL086W_ZTW1 rna-NM_001180145.1_ZTW1 cds-NP_010197.1_ZTW1 100.0 100.0 Verified 1 1 1 True True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047490.1:302554-303375:+ gene-YDL086W_Sparadoxus rna-NM_001180145.1_Sparadoxus cds-NP_010197.1_Sparadoxus 92.2 100.0 Verified 1 1 1 False True False False False

Additional files