Gene name: YDL085C-A
Reference locus (S288C): YDL085C-A
Gene biotype: protein_coding
Description: SERF-like protein YDL085C-A; Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and nucleus; Belongs to the SERF family
Top 10 interactors (score): YKL096C-B (0.813); YDL159W-A (0.813); YKL183C-A (0.813); NHP6A (0.768); NHP2 (0.683); POB3 (0.643); Q0255 (0.569); YAR068W (0.56); SSB1 (0.497); BRR2 (0.463); PRP8 (0.44); DUT1 (0.41); AAR2 (0.4)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005298.1:287078-287284:- | gene-YDL085C-A_AKU4011 | rna-NM_001184455.1_AKU4011 | cds-NP_075208.1_AKU4011 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000102.1:262667-262873:+ | gene-YDL085C-A_BG1 | rna-NM_001184455.1_BG1 | cds-NP_075208.1_BG1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005506.1:304745-304951:- | gene-YDL085C-A_Bruggeman | rna-NM_001184455.1_Bruggeman | cds-NP_075208.1_Bruggeman | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005522.1:301233-301439:- | gene-YDL085C-A_CAT1 | rna-NM_001184455.1_CAT1 | cds-NP_075208.1_CAT1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005362.1:285350-285556:- | gene-YDL085C-A_CBS1585 | rna-NM_001184455.1_CBS1585 | cds-NP_075208.1_CBS1585 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005346.1:302014-302220:- | gene-YDL085C-A_CBS436 | rna-NM_001184455.1_CBS436 | cds-NP_075208.1_CBS436 | 99.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005330.1:283778-283984:- | gene-YDL085C-A_CBS6412 | rna-NM_001184455.1_CBS6412 | cds-NP_075208.1_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005314.1:303403-303609:- | gene-YDL085C-A_CBS6413 | rna-NM_001184455.1_CBS6413 | cds-NP_075208.1_CBS6413 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001525.1:301287-301493:- | gene-YDL085C-A_CENPK1137D | rna-NM_001184455.1_CENPK1137D | cds-NP_075208.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005474.1:298112-298318:- | gene-YDL085C-A_EthanolRed | rna-NM_001184455.1_EthanolRed | cds-NP_075208.1_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005538.1:304084-304290:- | gene-YDL085C-A_FaliES1 | rna-NM_001184455.1_FaliES1 | cds-NP_075208.1_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000010.1:74134-74340:- | gene-YDL085C-A_JAY291 | rna-NM_001184455.1_JAY291 | cds-NP_075208.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005410.1:302261-302467:- | gene-YDL085C-A_MUCL30387 | rna-NM_001184455.1_MUCL30387 | cds-NP_075208.1_MUCL30387 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005442.1:293285-293491:- | gene-YDL085C-A_MUCL30388 | rna-NM_001184455.1_MUCL30388 | cds-NP_075208.1_MUCL30388 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005282.1:286455-286661:- | gene-YDL085C-A_MUCL39482 | rna-NM_001184455.1_MUCL39482 | cds-NP_075208.1_MUCL39482 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005426.1:208462-208668:- | gene-YDL085C-A_MUCL42920 | rna-NM_001184455.1_MUCL42920 | cds-NP_075208.1_MUCL42920 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011813.1:302387-302593:- | gene-YDL085C-A_NCIM3186 | rna-NM_001184455.1_NCIM3186 | cds-NP_075208.1_NCIM3186 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005266.1:286470-286676:- | gene-YDL085C-A_NCYC1407 | rna-NM_001184455.1_NCYC1407 | cds-NP_075208.1_NCYC1407 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994143.1:293252-293458:- | gene-YDL085C-A_PE2H3 | rna-NM_001184455.1_PE2H3 | cds-NP_075208.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:293249-293455:- | gene-YDL085C-A_PE2H4 | rna-NM_001184455.1_PE2H4 | cds-NP_075208.1_PE2H4 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:302464-302670:- | gene-YDL085C-A_S288C | rna-NM_001184455.1_S288C | cds-NP_075208.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000010.1:132253-132459:+ | gene-YDL085C-A_SA1 | rna-NM_001184455.1_SA1 | cds-NP_075208.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005490.1:303595-303801:- | gene-YDL085C-A_ThermosaccDry | rna-NM_001184455.1_ThermosaccDry | cds-NP_075208.1_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005458.1:305668-305874:- | gene-YDL085C-A_VR1 | rna-NM_001184455.1_VR1 | cds-NP_075208.1_VR1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000006.1:301509-301715:- | gene-YDL085C-A_ZTW1 | rna-NM_001184455.1_ZTW1 | cds-NP_075208.1_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:303602-303808:- | gene-YDL085C-A_Sparadoxus | rna-NM_001184455.1_Sparadoxus | cds-NP_075208.1_Sparadoxus | 93.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |