YDL057W (YDL057W)


Gene profile

Gene name: YDL057W
Reference locus (S288C): YDL057W
Gene biotype: protein_coding

Description: Putative uncharacterized protein ydl057w; Putative protein of unknown function; YDL057W is not an essential gene

Top 10 interactors (score): YDL009C (0.944); YDL012C (0.755); GRX6 (0.749); BOL1 (0.748); BOL2 (0.744); MXR2 (0.741); BOL3 (0.711); TRX3 (0.7); MES1 (0.687); SNM1 (0.677); BUD32 (0.672); GRX4 (0.671); URA4 (0.668); APC11 (0.651); MED2 (0.65); GLT1 (0.621); PRX1 (0.563); GRX3 (0.552); SAY1 (0.547); TRR1 (0.543)

Homologues (species, bitscore): AT3G47590 (Arabidopsis thaliana, 68.2)

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005298.1:336002-336988:+ gene-YDL057W_AKU4011 rna-NM_001180116.1_AKU4011 cds-NP_010226.1_AKU4011 99.5 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000102.1:213029-214015:- gene-YDL057W_BG1 rna-NM_001180116.1_BG1 cds-NP_010226.1_BG1 100.0 100.0 Verified 1 1 1 True True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005506.1:353821-354807:+ gene-YDL057W_Bruggeman rna-NM_001180116.1_Bruggeman cds-NP_010226.1_Bruggeman 99.1 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005522.1:350173-351159:+ gene-YDL057W_CAT1 rna-NM_001180116.1_CAT1 cds-NP_010226.1_CAT1 99.4 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005362.1:334280-335266:+ gene-YDL057W_CBS1585 rna-NM_001180116.1_CBS1585 cds-NP_010226.1_CBS1585 99.4 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005346.1:350986-351972:+ gene-YDL057W_CBS436 rna-NM_001180116.1_CBS436 cds-NP_010226.1_CBS436 100.0 100.0 Mismatch 1 1 1 True True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005330.1:332350-333336:+ gene-YDL057W_CBS6412 rna-NM_001180116.1_CBS6412 cds-NP_010226.1_CBS6412 99.6 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005314.1:352366-353352:+ gene-YDL057W_CBS6413 rna-NM_001180116.1_CBS6413 cds-NP_010226.1_CBS6413 99.4 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001525.1:350254-351240:+ gene-YDL057W_CENPK1137D rna-NM_001180116.1_CENPK1137D cds-NP_010226.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005474.1:346832-347818:+ gene-YDL057W_EthanolRed rna-NM_001180116.1_EthanolRed cds-NP_010226.1_EthanolRed 99.4 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005538.1:353079-354065:+ gene-YDL057W_FaliES1 rna-NM_001180116.1_FaliES1 cds-NP_010226.1_FaliES1 99.4 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000240.1:7431-8417:+ gene-YDL057W_JAY291 rna-NM_001180116.1_JAY291 cds-NP_010226.1_JAY291 100.0 100.0 Verified 1 1 1 True True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005410.1:351212-352198:+ gene-YDL057W_MUCL30387 rna-NM_001180116.1_MUCL30387 cds-NP_010226.1_MUCL30387 99.1 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005442.1:342338-343324:+ gene-YDL057W_MUCL30388 rna-NM_001180116.1_MUCL30388 cds-NP_010226.1_MUCL30388 99.1 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005282.1:335391-336377:+ gene-YDL057W_MUCL39482 rna-NM_001180116.1_MUCL39482 cds-NP_010226.1_MUCL39482 99.4 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005426.1:257408-258394:+ gene-YDL057W_MUCL42920 rna-NM_001180116.1_MUCL42920 cds-NP_010226.1_MUCL42920 99.5 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011813.1:351357-352343:+ gene-YDL057W_NCIM3186 rna-NM_001180116.1_NCIM3186 cds-NP_010226.1_NCIM3186 98.1 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005266.1:335388-336374:+ gene-YDL057W_NCYC1407 rna-NM_001180116.1_NCYC1407 cds-NP_010226.1_NCYC1407 99.5 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994143.1:342216-343202:+ gene-YDL057W_PE2H3 rna-NM_001180116.1_PE2H3 cds-NP_010226.1_PE2H3 100.0 100.0 Verified 1 1 1 True True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999875.1:342216-343202:+ gene-YDL057W_PE2H4 rna-NM_001180116.1_PE2H4 cds-NP_010226.1_PE2H4 100.0 100.0 Verified 1 1 1 True True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001136.10:351434-352420:+ gene-YDL057W_S288C rna-NM_001180116.1_S288C cds-NP_010226.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000010.1:82514-83500:- gene-YDL057W_SA1 rna-NM_001180116.1_SA1 cds-NP_010226.1_SA1 98.5 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005490.1:352531-353517:+ gene-YDL057W_ThermosaccDry rna-NM_001180116.1_ThermosaccDry cds-NP_010226.1_ThermosaccDry 99.4 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005458.1:355104-356090:+ gene-YDL057W_VR1 rna-NM_001180116.1_VR1 cds-NP_010226.1_VR1 100.0 100.0 Verified 1 1 1 True True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000006.1:350465-351451:+ gene-YDL057W_ZTW1 rna-NM_001180116.1_ZTW1 cds-NP_010226.1_ZTW1 99.4 100.0 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047490.1:352646-353632:+ gene-YDL057W_Sparadoxus rna-NM_001180116.1_Sparadoxus cds-NP_010226.1_Sparadoxus 86.8 99.8 Verified 1 1 1 False True False False False

Additional files