Gene name: YDL012C
Reference locus (S288C): YDL012C
Gene biotype: protein_coding
Description: Cysteine-rich and transmembrane domain-containing protein YDL012C; Tail-anchored plasma membrane protein with a conserved CYSTM module; possibly involved in response to stress; may contribute to non-homologous end-joining (NHEJ) based on ydl012c htz1 double null phenotype; YDL012C has a paralog, YBR016W, that arose from the whole genome duplication; Belongs to the CYSTM1 family
Top 10 interactors (score): YHR202W (0.759); YDL009C (0.755); YDL057W (0.755); YIL152W (0.75); RBH1 (0.746); YMR147W (0.745); YDR018C (0.744); GRX6 (0.716); YHR127W (0.711); LCL2 (0.672); YGL081W (0.651); YBR138C (0.617); PTC4 (0.617); YSP3 (0.581); TRP4 (0.572); GMC2 (0.567); NDL1 (0.566); BCH1 (0.562); PIG1 (0.557); REH1 (0.554)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005298.1:417192-417601:- | gene-YDL012C_AKU4011 | rna-NM_001180071.1_AKU4011 | cds-NP_010272.1_AKU4011 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000102.1:132285-132694:+ | gene-YDL012C_BG1 | rna-NM_001180071.1_BG1 | cds-NP_010272.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005506.1:437761-438170:- | gene-YDL012C_Bruggeman | rna-NM_001180071.1_Bruggeman | cds-NP_010272.1_Bruggeman | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005522.1:430656-431065:- | gene-YDL012C_CAT1 | rna-NM_001180071.1_CAT1 | cds-NP_010272.1_CAT1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005362.1:413605-414014:- | gene-YDL012C_CBS1585 | rna-NM_001180071.1_CBS1585 | cds-NP_010272.1_CBS1585 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005346.1:431133-431542:- | gene-YDL012C_CBS436 | rna-NM_001180071.1_CBS436 | cds-NP_010272.1_CBS436 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005330.1:411320-411729:- | gene-YDL012C_CBS6412 | rna-NM_001180071.1_CBS6412 | cds-NP_010272.1_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005314.1:433371-433780:- | gene-YDL012C_CBS6413 | rna-NM_001180071.1_CBS6413 | cds-NP_010272.1_CBS6413 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001525.1:429970-430379:- | gene-YDL012C_CENPK1137D | rna-NM_001180071.1_CENPK1137D | cds-NP_010272.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005474.1:426024-426433:- | gene-YDL012C_EthanolRed | rna-NM_001180071.1_EthanolRed | cds-NP_010272.1_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005538.1:432216-432625:- | gene-YDL012C_FaliES1 | rna-NM_001180071.1_FaliES1 | cds-NP_010272.1_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000370.1:46703-47112:- | gene-YDL012C_JAY291 | rna-NM_001180071.1_JAY291 | cds-NP_010272.1_JAY291 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005410.1:431651-432060:- | gene-YDL012C_MUCL30387 | rna-NM_001180071.1_MUCL30387 | cds-NP_010272.1_MUCL30387 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005442.1:422107-422516:- | gene-YDL012C_MUCL30388 | rna-NM_001180071.1_MUCL30388 | cds-NP_010272.1_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005282.1:415279-415688:- | gene-YDL012C_MUCL39482 | rna-NM_001180071.1_MUCL39482 | cds-NP_010272.1_MUCL39482 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005426.1:337159-337568:- | gene-YDL012C_MUCL42920 | rna-NM_001180071.1_MUCL42920 | cds-NP_010272.1_MUCL42920 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011813.1:431031-431440:- | gene-YDL012C_NCIM3186 | rna-NM_001180071.1_NCIM3186 | cds-NP_010272.1_NCIM3186 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005266.1:414701-415110:- | gene-YDL012C_NCYC1407 | rna-NM_001180071.1_NCYC1407 | cds-NP_010272.1_NCYC1407 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994143.1:422184-422593:- | gene-YDL012C_PE2H3 | rna-NM_001180071.1_PE2H3 | cds-NP_010272.1_PE2H3 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:421542-421951:- | gene-YDL012C_PE2H4 | rna-NM_001180071.1_PE2H4 | cds-NP_010272.1_PE2H4 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:431108-431517:- | gene-YDL012C_S288C | rna-NM_001180071.1_S288C | cds-NP_010272.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000010.1:3449-3858:+ | gene-YDL012C_SA1 | rna-NM_001180071.1_SA1 | cds-NP_010272.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005490.1:431676-432085:- | gene-YDL012C_ThermosaccDry | rna-NM_001180071.1_ThermosaccDry | cds-NP_010272.1_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005458.1:434689-435098:- | gene-YDL012C_VR1 | rna-NM_001180071.1_VR1 | cds-NP_010272.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000006.1:429574-429983:- | gene-YDL012C_ZTW1 | rna-NM_001180071.1_ZTW1 | cds-NP_010272.1_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:433730-434142:- | gene-YDL012C_Sparadoxus | rna-NM_001180071.1_Sparadoxus | cds-NP_010272.1_Sparadoxus | 90.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |