Gene name: YDL009C
Reference locus (S288C): YDL009C
Gene biotype: protein_coding
Description: Uncharacterized protein YDL009C; Protein of unknown function; mRNA identified as translated by ribosome profiling data; SWAT-GFP and mCherry fusion proteins localize to the cytosol; partially overlaps the verified ORF YDL010W; YDL009C is not an essential gene
Top 10 interactors (score): YDL057W (0.944); GRX6 (0.756); YDL012C (0.755); BOL1 (0.748); BOL2 (0.744); BOL3 (0.711); TRX3 (0.698); MXR2 (0.696); GRX4 (0.671); BUD32 (0.67); APC11 (0.651); MED2 (0.65); GLT1 (0.57); PRX1 (0.556); GRX3 (0.552); TRR1 (0.525); HYR1 (0.481); MCD1 (0.454); GRX8 (0.45); TRX1 (0.45)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005298.1:419007-419330:- | gene-YDL009C_AKU4011 | rna-NM_001270742.1_AKU4011 | cds-NP_001257671.1_AKU4011 | 97.2 | 99.6 | Unannotated | 1 | 1 | 0 | False | False | False | False | True |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000102.1:130555-130879:+ | gene-YDL009C_BG1 | rna-NM_001270742.1_BG1 | cds-NP_001257671.1_BG1 | 96.6 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005506.1:439576-439899:- | gene-YDL009C_Bruggeman | rna-NM_001270742.1_Bruggeman | cds-NP_001257671.1_Bruggeman | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005522.1:432471-432795:- | gene-YDL009C_CAT1 | rna-NM_001270742.1_CAT1 | cds-NP_001257671.1_CAT1 | 98.7 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005362.1:415420-415744:- | gene-YDL009C_CBS1585 | rna-NM_001270742.1_CBS1585 | cds-NP_001257671.1_CBS1585 | 97.8 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005346.1:432948-433271:- | gene-YDL009C_CBS436 | rna-NM_001270742.1_CBS436 | cds-NP_001257671.1_CBS436 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005330.1:413135-413458:- | gene-YDL009C_CBS6412 | rna-NM_001270742.1_CBS6412 | cds-NP_001257671.1_CBS6412 | 97.2 | 99.6 | Unannotated | 1 | 1 | 0 | False | False | False | False | True |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005314.1:435186-435510:- | gene-YDL009C_CBS6413 | rna-NM_001270742.1_CBS6413 | cds-NP_001257671.1_CBS6413 | 97.8 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001525.1:431787-432110:- | gene-YDL009C_CENPK1137D | rna-NM_001270742.1_CENPK1137D | cds-NP_001257671.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005474.1:427839-428163:- | gene-YDL009C_EthanolRed | rna-NM_001270742.1_EthanolRed | cds-NP_001257671.1_EthanolRed | 97.8 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005538.1:434031-434355:- | gene-YDL009C_FaliES1 | rna-NM_001270742.1_FaliES1 | cds-NP_001257671.1_FaliES1 | 97.8 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000370.1:48518-48841:- | gene-YDL009C_JAY291 | rna-NM_001270742.1_JAY291 | cds-NP_001257671.1_JAY291 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005410.1:433466-433789:- | gene-YDL009C_MUCL30387 | rna-NM_001270742.1_MUCL30387 | cds-NP_001257671.1_MUCL30387 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005442.1:423922-424245:- | gene-YDL009C_MUCL30388 | rna-NM_001270742.1_MUCL30388 | cds-NP_001257671.1_MUCL30388 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005282.1:417094-417418:- | gene-YDL009C_MUCL39482 | rna-NM_001270742.1_MUCL39482 | cds-NP_001257671.1_MUCL39482 | 97.8 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005426.1:338974-339297:- | gene-YDL009C_MUCL42920 | rna-NM_001270742.1_MUCL42920 | cds-NP_001257671.1_MUCL42920 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011813.1:432848-433171:- | gene-YDL009C_NCIM3186 | rna-NM_001270742.1_NCIM3186 | cds-NP_001257671.1_NCIM3186 | 97.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005266.1:416516-416839:- | gene-YDL009C_NCYC1407 | rna-NM_001270742.1_NCYC1407 | cds-NP_001257671.1_NCYC1407 | 97.2 | 99.6 | Unannotated | 1 | 1 | 0 | False | False | False | False | True |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994143.1:423999-424322:- | gene-YDL009C_PE2H3 | rna-NM_001270742.1_PE2H3 | cds-NP_001257671.1_PE2H3 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:423357-423681:- | gene-YDL009C_PE2H4 | rna-NM_001270742.1_PE2H4 | cds-NP_001257671.1_PE2H4 | 96.6 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:432925-433248:- | gene-YDL009C_S288C | rna-NM_001270742.1_S288C | cds-NP_001257671.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000010.1:1719-2043:+ | gene-YDL009C_SA1 | rna-NM_001270742.1_SA1 | cds-NP_001257671.1_SA1 | 96.6 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005490.1:433491-433815:- | gene-YDL009C_ThermosaccDry | rna-NM_001270742.1_ThermosaccDry | cds-NP_001257671.1_ThermosaccDry | 97.8 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005458.1:436504-436828:- | gene-YDL009C_VR1 | rna-NM_001270742.1_VR1 | cds-NP_001257671.1_VR1 | 96.6 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000006.1:431389-431713:- | gene-YDL009C_ZTW1 | rna-NM_001270742.1_ZTW1 | cds-NP_001257671.1_ZTW1 | 97.8 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:435548-435848:- | gene-YDL009C_Sparadoxus | rna-NM_001270742.1_Sparadoxus | cds-NP_001257671.1_Sparadoxus | 73.8 | 91.3 | Unannotated | 1 | 1 | 0 | False | False | True | False | False |