Gene name: YCR102C
Reference locus (S288C): YCR102C
Gene biotype: protein_coding
Description: Uncharacterized protein YCR102C; Putative protein of unknown function; involved in copper metabolism; similar to C. carbonum toxD gene; member of the quinone oxidoreductase family; Belongs to the YCR102c/YLR460c/YNL134c family
Top 10 interactors (score): YLR460C (0.903); YML131W (0.783); AAD4 (0.775); ETR1 (0.767); YKL070W (0.747); PAU8 (0.718); ECM4 (0.691); PAU11 (0.671); YML083C (0.659); ATR1 (0.655); AAD16 (0.648); YDL124W (0.647); YKL071W (0.647); TPS1 (0.643); MSC1 (0.642); PAU3 (0.63); NTH1 (0.621); NTH2 (0.621); PRM2 (0.615); HSP104 (0.602)
Homologues (species, bitscore): TP53I3 (Danio rerio, 63.9); tp53i3 (Xenopus tropicalis, 53.9); rad-8 (Caenorhabditis elegans, 50.4); AOR (Arabidopsis thaliana, 79.3)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000081.1:354-1548:+ | gene-YCR102C_BG1 | rna-NM_001178809.1_BG1 | cds-NP_010026.1_BG1 | 90.2 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005505.1:297087-298193:- | gene-YCR102C_Bruggeman | rna-NM_001178809.1_Bruggeman | cds-NP_010026.1_Bruggeman | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005521.1:306807-307931:- | gene-YCR102C_CAT1 | rna-NM_001178809.1_CAT1 | cds-NP_010026.1_CAT1 | 63.4 | 79.1 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005345.1:306669-307775:- | gene-YCR102C_CBS436 | rna-NM_001178809.1_CBS436 | cds-NP_010026.1_CBS436 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000168.1:2-329:- | gene-YCR102C_JAY291 | rna-NM_001178809.1_JAY291 | cds-NP_010026.1_JAY291 | 27.6 | 29.6 | Mismatch | 1 | 1 | 0 | False | False | True | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005409.1:294195-295301:- | gene-YCR102C_MUCL30387 | rna-NM_001178809.1_MUCL30387 | cds-NP_010026.1_MUCL30387 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005441.1:292591-293697:- | gene-YCR102C_MUCL30388 | rna-NM_001178809.1_MUCL30388 | cds-NP_010026.1_MUCL30388 | 99.3 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | False | True |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005425.1:297157-298263:- | gene-YCR102C_MUCL42920 | rna-NM_001178809.1_MUCL42920 | cds-NP_010026.1_MUCL42920 | 99.3 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | False | True |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011812.1:303993-305099:- | gene-YCR102C_NCIM3186 | rna-NM_001178809.1_NCIM3186 | cds-NP_010026.1_NCIM3186 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994151.1:1036993-1038099:- | gene-YCR102C_PE2H3 | rna-NM_001178809.1_PE2H3 | cds-NP_010026.1_PE2H3 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999874.1:310242-311348:- | gene-YCR102C_PE2H4 | rna-NM_001178809.1_PE2H4 | cds-NP_010026.1_PE2H4 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001135.5:304361-305467:- | gene-YCR102C_S288C | rna-NM_001178809.1_S288C | cds-NP_010026.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005457.1:313121-314476:- | gene-YCR102C_VR1 | rna-NM_001178809.1_VR1 | cds-NP_010026.1_VR1 | 79.5 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000004.1:298522-299628:- | gene-YCR102C_ZTW1 | rna-NM_001178809.1_ZTW1 | cds-NP_010026.1_ZTW1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047498.1:1009719-1010825:- | gene-YCR102C_Sparadoxus | rna-NM_001178809.1_Sparadoxus | cds-NP_010026.1_Sparadoxus | 91.2 | 99.8 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |