YCR050C (YCR050C)

Gene profile

Gene name: YCR050C
Reference locus (S288C): YCR050C
Gene biotype: protein_coding

Description: Uncharacterized protein YCR050C; Non-essential protein of unknown function; deletion mutant is synthetically sick or lethal with alpha-synuclein

Top 10 interactors (score): Unknown

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005297.1:207922-208230:- gene-YCR050C_AKU4011 rna-NM_001178764.1_AKU4011 cds-NP_009979.1_AKU4011 99.6 100.0 Verified 1 1 1 True True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000067.1:62125-62433:- gene-YCR050C_BG1 rna-NM_001178764.1_BG1 cds-NP_009979.1_BG1 100.0 100.0 Verified 1 1 1 True True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005505.1:203881-204189:- gene-YCR050C_Bruggeman rna-NM_001178764.1_Bruggeman cds-NP_009979.1_Bruggeman 99.0 100.0 Mismatch 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005521.1:215256-215564:- gene-YCR050C_CAT1 rna-NM_001178764.1_CAT1 cds-NP_009979.1_CAT1 99.6 100.0 Verified 1 1 1 True True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005361.1:202700-203008:- gene-YCR050C_CBS1585 rna-NM_001178764.1_CBS1585 cds-NP_009979.1_CBS1585 99.6 100.0 Verified 1 1 1 True True False False False
CBS436 GCA_001738355.1 Sake Asia CM005345.1:214597-214905:- gene-YCR050C_CBS436 rna-NM_001178764.1_CBS436 cds-NP_009979.1_CBS436 100.0 100.0 Mismatch 1 1 1 True True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005329.1:194440-194748:- gene-YCR050C_CBS6412 rna-NM_001178764.1_CBS6412 cds-NP_009979.1_CBS6412 99.6 100.0 Mismatch 1 1 1 True True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005313.1:208817-209125:- gene-YCR050C_CBS6413 rna-NM_001178764.1_CBS6413 cds-NP_009979.1_CBS6413 99.6 100.0 Verified 1 1 1 True True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001524.1:212646-212954:- gene-YCR050C_CENPK1137D rna-NM_001178764.1_CENPK1137D cds-NP_009979.1_CENPK1137D 99.3 100.0 Verified 1 1 1 False True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005473.1:203885-204193:- gene-YCR050C_EthanolRed rna-NM_001178764.1_EthanolRed cds-NP_009979.1_EthanolRed 99.6 100.0 Verified 1 1 1 True True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005537.1:209050-209358:- gene-YCR050C_FaliES1 rna-NM_001178764.1_FaliES1 cds-NP_009979.1_FaliES1 99.6 100.0 Verified 1 1 1 True True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000014.1:13821-14129:+ gene-YCR050C_JAY291 rna-NM_001178764.1_JAY291 cds-NP_009979.1_JAY291 100.0 100.0 Verified 1 1 1 True True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005409.1:200865-201173:- gene-YCR050C_MUCL30387 rna-NM_001178764.1_MUCL30387 cds-NP_009979.1_MUCL30387 99.3 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005441.1:200239-200547:- gene-YCR050C_MUCL30388 rna-NM_001178764.1_MUCL30388 cds-NP_009979.1_MUCL30388 99.6 100.0 Verified 1 1 1 True True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005281.1:209273-209581:- gene-YCR050C_MUCL39482 rna-NM_001178764.1_MUCL39482 cds-NP_009979.1_MUCL39482 99.6 100.0 Verified 1 1 1 True True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005425.1:205714-206022:- gene-YCR050C_MUCL42920 rna-NM_001178764.1_MUCL42920 cds-NP_009979.1_MUCL42920 99.0 100.0 Mismatch 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011812.1:213096-213404:- gene-YCR050C_NCIM3186 rna-NM_001178764.1_NCIM3186 cds-NP_009979.1_NCIM3186 99.3 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005265.1:210132-210440:- gene-YCR050C_NCYC1407 rna-NM_001178764.1_NCYC1407 cds-NP_009979.1_NCYC1407 99.6 100.0 Verified 1 1 1 True True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994142.1:218811-219119:- gene-YCR050C_PE2H3 rna-NM_001178764.1_PE2H3 cds-NP_009979.1_PE2H3 100.0 100.0 Verified 1 1 1 True True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999874.1:213337-213645:- gene-YCR050C_PE2H4 rna-NM_001178764.1_PE2H4 cds-NP_009979.1_PE2H4 100.0 100.0 Verified 1 1 1 True True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001135.5:213464-213772:- gene-YCR050C_S288C rna-NM_001178764.1_S288C cds-NP_009979.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000044.1:13347-13655:- gene-YCR050C_SA1 rna-NM_001178764.1_SA1 cds-NP_009979.1_SA1 99.6 100.0 Verified 1 1 1 True True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005489.1:209033-209341:- gene-YCR050C_ThermosaccDry rna-NM_001178764.1_ThermosaccDry cds-NP_009979.1_ThermosaccDry 99.6 100.0 Verified 1 1 1 True True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005457.1:220309-220617:- gene-YCR050C_VR1 rna-NM_001178764.1_VR1 cds-NP_009979.1_VR1 100.0 100.0 Verified 1 1 1 True True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000004.1:206856-207164:- gene-YCR050C_ZTW1 rna-NM_001178764.1_ZTW1 cds-NP_009979.1_ZTW1 99.6 100.0 Verified 1 1 1 True True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047489.1:241009-241317:- gene-YCR050C_Sparadoxus rna-NM_001178764.1_Sparadoxus cds-NP_009979.1_Sparadoxus 91.2 100.0 Unannotated 1 1 0 False False False False True

Additional files