Gene name: YCR043C
Reference locus (S288C): YCR043C
Gene biotype: protein_coding
Description: Uncharacterized protein YCR043C; Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the Golgi apparatus; YCR043C is not an essential gene
Top 10 interactors (score): YCR047W-A (0.813); ANP1 (0.779); YFR054C (0.76); PAL1 (0.75); BIL1 (0.744); RBK1 (0.744); TDA2 (0.716); YMR295C (0.69); IMG1 (0.656); DUG1 (0.618); RRT12 (0.618); PER1 (0.617); RVS161 (0.604); ARE1 (0.574); SNT1 (0.526); MNN11 (0.503); CAP2 (0.499); RET2 (0.499); SNA3 (0.487); MNN9 (0.459)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005297.1:200694-201077:- | gene-YCR043C_AKU4011 | rna-NM_001178757.1_AKU4011 | cds-NP_009972.1_AKU4011 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000067.1:54885-55268:- | gene-YCR043C_BG1 | rna-NM_001178757.1_BG1 | cds-NP_009972.1_BG1 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005505.1:196697-197080:- | gene-YCR043C_Bruggeman | rna-NM_001178757.1_Bruggeman | cds-NP_009972.1_Bruggeman | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005521.1:208050-208433:- | gene-YCR043C_CAT1 | rna-NM_001178757.1_CAT1 | cds-NP_009972.1_CAT1 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005361.1:195491-195874:- | gene-YCR043C_CBS1585 | rna-NM_001178757.1_CBS1585 | cds-NP_009972.1_CBS1585 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005345.1:207398-207781:- | gene-YCR043C_CBS436 | rna-NM_001178757.1_CBS436 | cds-NP_009972.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005329.1:187213-187596:- | gene-YCR043C_CBS6412 | rna-NM_001178757.1_CBS6412 | cds-NP_009972.1_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005313.1:201580-201963:- | gene-YCR043C_CBS6413 | rna-NM_001178757.1_CBS6413 | cds-NP_009972.1_CBS6413 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001524.1:205327-205710:- | gene-YCR043C_CENPK1137D | rna-NM_001178757.1_CENPK1137D | cds-NP_009972.1_CENPK1137D | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005473.1:196684-197067:- | gene-YCR043C_EthanolRed | rna-NM_001178757.1_EthanolRed | cds-NP_009972.1_EthanolRed | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005537.1:201856-202239:- | gene-YCR043C_FaliES1 | rna-NM_001178757.1_FaliES1 | cds-NP_009972.1_FaliES1 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000014.1:20928-21311:+ | gene-YCR043C_JAY291 | rna-NM_001178757.1_JAY291 | cds-NP_009972.1_JAY291 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005409.1:193664-194047:- | gene-YCR043C_MUCL30387 | rna-NM_001178757.1_MUCL30387 | cds-NP_009972.1_MUCL30387 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005441.1:193051-193434:- | gene-YCR043C_MUCL30388 | rna-NM_001178757.1_MUCL30388 | cds-NP_009972.1_MUCL30388 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005281.1:202064-202447:- | gene-YCR043C_MUCL39482 | rna-NM_001178757.1_MUCL39482 | cds-NP_009972.1_MUCL39482 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005425.1:198515-198898:- | gene-YCR043C_MUCL42920 | rna-NM_001178757.1_MUCL42920 | cds-NP_009972.1_MUCL42920 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011812.1:205893-206276:- | gene-YCR043C_NCIM3186 | rna-NM_001178757.1_NCIM3186 | cds-NP_009972.1_NCIM3186 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005265.1:202956-203339:- | gene-YCR043C_NCYC1407 | rna-NM_001178757.1_NCYC1407 | cds-NP_009972.1_NCYC1407 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994142.1:211624-212007:- | gene-YCR043C_PE2H3 | rna-NM_001178757.1_PE2H3 | cds-NP_009972.1_PE2H3 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999874.1:206155-206538:- | gene-YCR043C_PE2H4 | rna-NM_001178757.1_PE2H4 | cds-NP_009972.1_PE2H4 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001135.5:206261-206644:- | gene-YCR043C_S288C | rna-NM_001178757.1_S288C | cds-NP_009972.1_S288C | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000044.1:6143-6526:- | gene-YCR043C_SA1 | rna-NM_001178757.1_SA1 | cds-NP_009972.1_SA1 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005489.1:201832-202215:- | gene-YCR043C_ThermosaccDry | rna-NM_001178757.1_ThermosaccDry | cds-NP_009972.1_ThermosaccDry | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005457.1:213111-213494:- | gene-YCR043C_VR1 | rna-NM_001178757.1_VR1 | cds-NP_009972.1_VR1 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000004.1:199640-200023:- | gene-YCR043C_ZTW1 | rna-NM_001178757.1_ZTW1 | cds-NP_009972.1_ZTW1 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047489.1:233806-234189:- | gene-YCR043C_Sparadoxus | rna-NM_001178757.1_Sparadoxus | cds-NP_009972.1_Sparadoxus | 91.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |