Gene name: YCR041W
Reference locus (S288C): YCR041W
Gene biotype: protein_coding
Description: Uncharacterized protein YCR041W; Protein of unknown function; overexpression suppresses the high-frequency loss of mini-chromosomes, probably by increasing the rate of proper chromosome segregation; translated gene product of YCR041W, but not its transcript, is responsible for suppression; suppression ability of YCR041W is completely dependent on silencing protein Sir4p
Top 10 interactors (score): HMLALPHA1 (0.872); SIR4 (0.781); STE20 (0.696); YCL065W (0.454)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005297.1:195405-195720:+ | gene-YCR041W_AKU4011 | rna-NM_001310667.1_AKU4011 | cds-NP_001297596.1_AKU4011 | 89.7 | 94.8 | Unannotated | 1 | 1 | 0 | False | False | True | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000067.1:48868-49200:+ | gene-YCR041W_BG1 | rna-NM_001310667.1_BG1 | cds-NP_001297596.1_BG1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005505.1:191103-191435:+ | gene-YCR041W_Bruggeman | rna-NM_001310667.1_Bruggeman | cds-NP_001297596.1_Bruggeman | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005521.1:202718-203033:+ | gene-YCR041W_CAT1 | rna-NM_001310667.1_CAT1 | cds-NP_001297596.1_CAT1 | 89.7 | 94.8 | Unannotated | 1 | 1 | 0 | False | False | True | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005361.1:190149-190481:+ | gene-YCR041W_CBS1585 | rna-NM_001310667.1_CBS1585 | cds-NP_001297596.1_CBS1585 | 97.8 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | False | True |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005345.1:201796-202377:+ | gene-YCR041W_CBS436 | rna-NM_001310667.1_CBS436 | cds-NP_001297596.1_CBS436 | 57.0 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005329.1:181871-182203:+ | gene-YCR041W_CBS6412 | rna-NM_001310667.1_CBS6412 | cds-NP_001297596.1_CBS6412 | 89.4 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | True | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005313.1:196246-196570:+ | gene-YCR041W_CBS6413 | rna-NM_001310667.1_CBS6413 | cds-NP_001297596.1_CBS6413 | 91.2 | 97.5 | Unannotated | 1 | 1 | 0 | False | False | True | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | JH711428.1:61-214:+ | gene-YCR041W_CENPK1137D | rna-NM_001310667.1_CENPK1137D | cds-NP_001297596.1_CENPK1137D | 46.2 | 46.2 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005473.1:191342-191674:+ | gene-YCR041W_EthanolRed | rna-NM_001310667.1_EthanolRed | cds-NP_001297596.1_EthanolRed | 95.1 | 100.0 | Verified | 1 | 1 | 0 | False | False | True | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005537.1:196265-196846:+ | gene-YCR041W_FaliES1 | rna-NM_001310667.1_FaliES1 | cds-NP_001297596.1_FaliES1 | 55.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000014.1:26328-26427:- | gene-YCR041W_JAY291 | rna-NM_001310667.1_JAY291 | cds-NP_001297596.1_JAY291 | 29.7 | 30.0 | Mismatch | 1 | 1 | 0 | False | False | True | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005409.1:188322-188654:+ | gene-YCR041W_MUCL30387 | rna-NM_001310667.1_MUCL30387 | cds-NP_001297596.1_MUCL30387 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005281.1:196739-197054:+ | gene-YCR041W_MUCL39482 | rna-NM_001310667.1_MUCL39482 | cds-NP_001297596.1_MUCL39482 | 89.7 | 94.8 | Unannotated | 1 | 1 | 0 | False | False | True | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | MBVV01000159.1:18-350:- | gene-YCR041W_MUCL42920 | rna-NM_001310667.1_MUCL42920 | cds-NP_001297596.1_MUCL42920 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011812.1:200543-200875:+ | gene-YCR041W_NCIM3186 | rna-NM_001310667.1_NCIM3186 | cds-NP_001297596.1_NCIM3186 | 97.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005265.1:16185-16484:+ | gene-YCR041W_NCYC1407 | rna-NM_001310667.1_NCYC1407 | cds-NP_001297596.1_NCYC1407 | 83.8 | 89.7 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994142.1:206275-206607:+ | gene-YCR041W_PE2H3 | rna-NM_001310667.1_PE2H3 | cds-NP_001297596.1_PE2H3 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999874.1:200806-201138:+ | gene-YCR041W_PE2H4 | rna-NM_001310667.1_PE2H4 | cds-NP_001297596.1_PE2H4 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001135.5:200911-201243:+ | gene-YCR041W_S288C | rna-NM_001310667.1_S288C | cds-NP_001297596.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000044.1:794-1126:+ | gene-YCR041W_SA1 | rna-NM_001310667.1_SA1 | cds-NP_001297596.1_SA1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005489.1:196241-196822:+ | gene-YCR041W_ThermosaccDry | rna-NM_001310667.1_ThermosaccDry | cds-NP_001297596.1_ThermosaccDry | 55.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005457.1:207513-208094:+ | gene-YCR041W_VR1 | rna-NM_001310667.1_VR1 | cds-NP_001297596.1_VR1 | 57.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000004.1:194298-194630:+ | gene-YCR041W_ZTW1 | rna-NM_001310667.1_ZTW1 | cds-NP_001297596.1_ZTW1 | 98.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047489.1:228431-228769:+ | gene-YCR041W_Sparadoxus | rna-NM_001310667.1_Sparadoxus | cds-NP_001297596.1_Sparadoxus | 88.8 | 99.3 | Unannotated | 1 | 1 | 0 | False | False | False | False | True |