YCR024C-B (YCR024C-B)


Gene profile

Gene name: YCR024C-B
Reference locus (S288C): YCR024C-B
Gene biotype: protein_coding

Description: Uncharacterized protein YCR024C-B; Putative protein of unknown function; identified by expression profiling and mass spectrometry

Top 10 interactors (score): YCL042W (0.944); YCL001W-A (0.913); OCA4 (0.847); PMP1 (0.766); VBA3 (0.76); YCL068C (0.747); YCL001W-B (0.71); FIG2 (0.707); TEF1 (0.65); YCL049C (0.613); CTO1 (0.61); TPI1 (0.606); GLK1 (0.568); SRD1 (0.525); SOL2 (0.499); FEN2 (0.485); PER1 (0.482)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005297.1:157085-157350:- gene-YCR024C-B_AKU4011 rna-NM_001184645.1_AKU4011 cds-NP_878057.1_AKU4011 99.2 99.6 Unannotated 1 1 0 False False False True False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000067.1:11239-11504:- gene-YCR024C-B_BG1 rna-NM_001184645.1_BG1 cds-NP_878057.1_BG1 99.2 99.6 Unannotated 1 1 0 False False False True False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005505.1:152405-152670:- gene-YCR024C-B_Bruggeman rna-NM_001184645.1_Bruggeman cds-NP_878057.1_Bruggeman 98.8 99.6 Unannotated 1 1 0 False False False True False
CAT1 GCA_001738705.1 Bioethanol South America CM005521.1:163975-164240:- gene-YCR024C-B_CAT1 rna-NM_001184645.1_CAT1 cds-NP_878057.1_CAT1 99.2 99.6 Unannotated 1 1 0 False False False True False
CBS1585 GCA_001738375.1 Sake Asia CM005361.1:151846-152111:- gene-YCR024C-B_CBS1585 rna-NM_001184645.1_CBS1585 cds-NP_878057.1_CBS1585 99.2 99.6 Unannotated 1 1 0 False False False True False
CBS436 GCA_001738355.1 Sake Asia CM005345.1:162986-163251:- gene-YCR024C-B_CBS436 rna-NM_001184645.1_CBS436 cds-NP_878057.1_CBS436 99.2 99.6 Unannotated 1 1 0 False False False True False
CBS6412 GCA_001738345.1 Sake Asia CM005329.1:145699-145964:- gene-YCR024C-B_CBS6412 rna-NM_001184645.1_CBS6412 cds-NP_878057.1_CBS6412 98.8 99.6 Unannotated 1 1 0 False False False True False
CBS6413 GCA_001738265.1 Sake Asia CM005313.1:158023-158288:- gene-YCR024C-B_CBS6413 rna-NM_001184645.1_CBS6413 cds-NP_878057.1_CBS6413 99.2 99.6 Unannotated 1 1 0 False False False True False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001524.1:162082-162347:- gene-YCR024C-B_CENPK1137D rna-NM_001184645.1_CENPK1137D cds-NP_878057.1_CENPK1137D 98.8 99.6 Unannotated 1 1 0 False False False True False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005473.1:155093-155358:- gene-YCR024C-B_EthanolRed rna-NM_001184645.1_EthanolRed cds-NP_878057.1_EthanolRed 98.8 99.6 Unannotated 1 1 0 False False False True False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005537.1:157954-158219:- gene-YCR024C-B_FaliES1 rna-NM_001184645.1_FaliES1 cds-NP_878057.1_FaliES1 98.8 99.6 Unannotated 1 1 0 False False False True False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000371.1:5556-5820:+ gene-YCR024C-B_JAY291 rna-NM_001184645.1_JAY291 cds-NP_878057.1_JAY291 98.8 99.2 Unannotated 1 1 0 False False False True False
MUCL30387 GCA_001738515.1 Bread Europe CM005409.1:149584-149849:- gene-YCR024C-B_MUCL30387 rna-NM_001184645.1_MUCL30387 cds-NP_878057.1_MUCL30387 98.8 99.6 Unannotated 1 1 0 False False False True False
MUCL30388 GCA_001738495.1 Bread Europe CM005441.1:149852-150117:- gene-YCR024C-B_MUCL30388 rna-NM_001184645.1_MUCL30388 cds-NP_878057.1_MUCL30388 99.2 99.6 Unannotated 1 1 0 False False False True False
MUCL39482 GCA_001738235.1 Sake Asia CM005281.1:158170-158435:- gene-YCR024C-B_MUCL39482 rna-NM_001184645.1_MUCL39482 cds-NP_878057.1_MUCL39482 99.2 99.6 Unannotated 1 1 0 False False False True False
MUCL42920 GCA_001738485.1 Bread Europe CM005425.1:154564-154829:- gene-YCR024C-B_MUCL42920 rna-NM_001184645.1_MUCL42920 cds-NP_878057.1_MUCL42920 99.2 99.6 Unannotated 1 1 0 False False False True False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011812.1:162231-162497:- gene-YCR024C-B_NCIM3186 rna-NM_001184645.1_NCIM3186 cds-NP_878057.1_NCIM3186 99.2 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005265.1:159934-160199:- gene-YCR024C-B_NCYC1407 rna-NM_001184645.1_NCYC1407 cds-NP_878057.1_NCYC1407 99.2 99.6 Unannotated 1 1 0 False False False True False
PE2H3 GCA_905220325.1 Bioethanol South America HG994142.1:168638-168903:- gene-YCR024C-B_PE2H3 rna-NM_001184645.1_PE2H3 cds-NP_878057.1_PE2H3 99.2 99.6 Unannotated 1 1 0 False False False True False
PE2H4 GCA_905220315.1 Bioethanol South America LR999874.1:163259-163524:- gene-YCR024C-B_PE2H4 rna-NM_001184645.1_PE2H4 cds-NP_878057.1_PE2H4 99.2 99.6 Unannotated 1 1 0 False False False True False
S288C GCF_000146045.2 Laboratory Not applicable NC_001135.5:162599-162865:- gene-YCR024C-B_S288C rna-NM_001184645.1_S288C cds-NP_878057.1_S288C 100.0 100.0 Mismatch 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000083.1:11129-11394:- gene-YCR024C-B_SA1 rna-NM_001184645.1_SA1 cds-NP_878057.1_SA1 99.2 99.6 Unannotated 1 1 0 False False False True False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005489.1:158025-158290:- gene-YCR024C-B_ThermosaccDry rna-NM_001184645.1_ThermosaccDry cds-NP_878057.1_ThermosaccDry 98.8 99.6 Unannotated 1 1 0 False False False True False
VR1 GCA_001738595.1 Bioethanol South America CM005457.1:168790-169055:- gene-YCR024C-B_VR1 rna-NM_001184645.1_VR1 cds-NP_878057.1_VR1 99.2 99.6 Unannotated 1 1 0 False False False True False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000004.1:156958-157223:- gene-YCR024C-B_ZTW1 rna-NM_001184645.1_ZTW1 cds-NP_878057.1_ZTW1 99.2 99.6 Unannotated 1 1 0 False False False True False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047489.1:190217-190489:- gene-YCR024C-B_Sparadoxus rna-NM_001184645.1_Sparadoxus cds-NP_878057.1_Sparadoxus 88.4 98.5 Unannotated 1 1 0 False False True False False

Additional files