Gene name: YCR016W
Reference locus (S288C): YCR016W
Gene biotype: protein_coding
Description: Uncharacterized protein YCR016W; Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the nucleolus and nucleus; predicted to be involved in ribosome biogenesis
Top 10 interactors (score): RRT14 (0.976); YBL028C (0.958); MAK16 (0.947); BUD22 (0.931); SPB1 (0.925); CGR1 (0.908); BMT5 (0.907); NOP14 (0.9); FCF2 (0.899); TMA16 (0.891); KRR1 (0.888); PWP1 (0.885); NOP7 (0.876); NOP13 (0.867); CIC1 (0.865); EBP2 (0.863); NOP15 (0.86); YCR087C-A (0.859); BCP1 (0.859); RSA3 (0.856)
Homologues (species, bitscore): C7orf50 (Homo sapiens, 50.1)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005297.1:138108-138980:+ | gene-YCR016W_AKU4011 | rna-NM_001178729.1_AKU4011 | cds-NP_009942.2_AKU4011 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000178.1:7126-7998:- | gene-YCR016W_BG1 | rna-NM_001178729.1_BG1 | cds-NP_009942.2_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005505.1:134421-135293:+ | gene-YCR016W_Bruggeman | rna-NM_001178729.1_Bruggeman | cds-NP_009942.2_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005521.1:144470-145342:+ | gene-YCR016W_CAT1 | rna-NM_001178729.1_CAT1 | cds-NP_009942.2_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | MBVS01000051.1:5569-6441:- | gene-YCR016W_CBS1585 | rna-NM_001178729.1_CBS1585 | cds-NP_009942.2_CBS1585 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005345.1:144019-144891:+ | gene-YCR016W_CBS436 | rna-NM_001178729.1_CBS436 | cds-NP_009942.2_CBS436 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005329.1:126223-127095:+ | gene-YCR016W_CBS6412 | rna-NM_001178729.1_CBS6412 | cds-NP_009942.2_CBS6412 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005313.1:138553-139425:+ | gene-YCR016W_CBS6413 | rna-NM_001178729.1_CBS6413 | cds-NP_009942.2_CBS6413 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001524.1:124494-125366:+ | gene-YCR016W_CENPK1137D | rna-NM_001178729.1_CENPK1137D | cds-NP_009942.2_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005473.1:136127-136999:+ | gene-YCR016W_EthanolRed | rna-NM_001178729.1_EthanolRed | cds-NP_009942.2_EthanolRed | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005537.1:138924-139796:+ | gene-YCR016W_FaliES1 | rna-NM_001178729.1_FaliES1 | cds-NP_009942.2_FaliES1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000232.1:7046-7918:- | gene-YCR016W_JAY291 | rna-NM_001178729.1_JAY291 | cds-NP_009942.2_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005409.1:131728-132600:+ | gene-YCR016W_MUCL30387 | rna-NM_001178729.1_MUCL30387 | cds-NP_009942.2_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005441.1:130597-131469:+ | gene-YCR016W_MUCL30388 | rna-NM_001178729.1_MUCL30388 | cds-NP_009942.2_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005281.1:139177-140049:+ | gene-YCR016W_MUCL39482 | rna-NM_001178729.1_MUCL39482 | cds-NP_009942.2_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005425.1:135244-136116:+ | gene-YCR016W_MUCL42920 | rna-NM_001178729.1_MUCL42920 | cds-NP_009942.2_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011812.1:143266-144138:+ | gene-YCR016W_NCIM3186 | rna-NM_001178729.1_NCIM3186 | cds-NP_009942.2_NCIM3186 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005265.1:139907-140779:+ | gene-YCR016W_NCYC1407 | rna-NM_001178729.1_NCYC1407 | cds-NP_009942.2_NCYC1407 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994142.1:143753-144625:+ | gene-YCR016W_PE2H3 | rna-NM_001178729.1_PE2H3 | cds-NP_009942.2_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999874.1:144291-145163:+ | gene-YCR016W_PE2H4 | rna-NM_001178729.1_PE2H4 | cds-NP_009942.2_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001135.5:143634-144506:+ | gene-YCR016W_S288C | rna-NM_001178729.1_S288C | cds-NP_009942.2_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000073.1:7163-8035:- | gene-YCR016W_SA1 | rna-NM_001178729.1_SA1 | cds-NP_009942.2_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005489.1:138993-139865:+ | gene-YCR016W_ThermosaccDry | rna-NM_001178729.1_ThermosaccDry | cds-NP_009942.2_ThermosaccDry | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005457.1:149822-150694:+ | gene-YCR016W_VR1 | rna-NM_001178729.1_VR1 | cds-NP_009942.2_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000004.1:137928-138800:+ | gene-YCR016W_ZTW1 | rna-NM_001178729.1_ZTW1 | cds-NP_009942.2_ZTW1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047489.1:171325-172200:+ | gene-YCR016W_Sparadoxus | rna-NM_001178729.1_Sparadoxus | cds-NP_009942.2_Sparadoxus | 85.5 | 99.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |