YCR006C (YCR006C)

Gene profile

Gene name: YCR006C
Reference locus (S288C): YCR006C
Gene biotype: protein_coding

Description: Uncharacterized protein YCR006C; Putative protein of unknown function; conserved among S. cerevisiae strains; YCR006C is not an essential gene

Top 10 interactors (score): Unknown

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005297.1:117239-117712:- gene-YCR006C_AKU4011 rna-NM_001348894.1_AKU4011 cds-NP_001335749.1_AKU4011 98.9 100.0 Verified 1 1 0 False False True False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000178.1:28318-28791:+ gene-YCR006C_BG1 rna-NM_001348894.1_BG1 cds-NP_001335749.1_BG1 99.3 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005505.1:113053-113526:- gene-YCR006C_Bruggeman rna-NM_001348894.1_Bruggeman cds-NP_001335749.1_Bruggeman 99.3 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005521.1:117571-118044:- gene-YCR006C_CAT1 rna-NM_001348894.1_CAT1 cds-NP_001335749.1_CAT1 99.1 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005361.1:117888-118361:- gene-YCR006C_CBS1585 rna-NM_001348894.1_CBS1585 cds-NP_001335749.1_CBS1585 98.9 100.0 Verified 1 1 0 False False True False False
CBS436 GCA_001738355.1 Sake Asia CM005345.1:122813-123286:- gene-YCR006C_CBS436 rna-NM_001348894.1_CBS436 cds-NP_001335749.1_CBS436 99.7 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005329.1:105348-105821:- gene-YCR006C_CBS6412 rna-NM_001348894.1_CBS6412 cds-NP_001335749.1_CBS6412 98.9 100.0 Mismatch 1 1 0 False False True False False
CBS6413 GCA_001738265.1 Sake Asia CM005313.1:117195-117668:- gene-YCR006C_CBS6413 rna-NM_001348894.1_CBS6413 cds-NP_001335749.1_CBS6413 98.9 100.0 Verified 1 1 0 False False True False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001524.1:122005-122478:- gene-YCR006C_CENPK1137D rna-NM_001348894.1_CENPK1137D cds-NP_001335749.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005473.1:115257-115730:- gene-YCR006C_EthanolRed rna-NM_001348894.1_EthanolRed cds-NP_001335749.1_EthanolRed 99.1 100.0 Verified 1 1 0 False False True False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005537.1:117555-118028:- gene-YCR006C_FaliES1 rna-NM_001348894.1_FaliES1 cds-NP_001335749.1_FaliES1 99.1 100.0 Verified 1 1 0 False False True False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000126.1:31728-32201:- gene-YCR006C_JAY291 rna-NM_001348894.1_JAY291 cds-NP_001335749.1_JAY291 99.3 100.0 Verified 1 1 1 False True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005409.1:110270-110743:- gene-YCR006C_MUCL30387 rna-NM_001348894.1_MUCL30387 cds-NP_001335749.1_MUCL30387 99.1 100.0 Verified 1 1 0 False False True False False
MUCL30388 GCA_001738495.1 Bread Europe CM005441.1:109828-110301:- gene-YCR006C_MUCL30388 rna-NM_001348894.1_MUCL30388 cds-NP_001335749.1_MUCL30388 99.5 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005281.1:118305-118778:- gene-YCR006C_MUCL39482 rna-NM_001348894.1_MUCL39482 cds-NP_001335749.1_MUCL39482 98.9 100.0 Verified 1 1 0 False False True False False
MUCL42920 GCA_001738485.1 Bread Europe CM005425.1:113545-114018:- gene-YCR006C_MUCL42920 rna-NM_001348894.1_MUCL42920 cds-NP_001335749.1_MUCL42920 99.1 100.0 Verified 1 1 0 False False True False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011812.1:122162-122635:- gene-YCR006C_NCIM3186 rna-NM_001348894.1_NCIM3186 cds-NP_001335749.1_NCIM3186 98.9 100.0 Verified 1 1 0 False False True False False
NCYC1407 GCA_001738225.1 Sake Asia CM005265.1:118788-119261:- gene-YCR006C_NCYC1407 rna-NM_001348894.1_NCYC1407 cds-NP_001335749.1_NCYC1407 98.9 100.0 Verified 1 1 0 False False True False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994142.1:122960-123433:- gene-YCR006C_PE2H3 rna-NM_001348894.1_PE2H3 cds-NP_001335749.1_PE2H3 99.3 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999874.1:122924-123397:- gene-YCR006C_PE2H4 rna-NM_001348894.1_PE2H4 cds-NP_001335749.1_PE2H4 99.3 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001135.5:122530-123003:- gene-YCR006C_S288C rna-NM_001348894.1_S288C cds-NP_001335749.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000073.1:28330-28803:+ gene-YCR006C_SA1 rna-NM_001348894.1_SA1 cds-NP_001335749.1_SA1 99.3 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005489.1:118123-118596:- gene-YCR006C_ThermosaccDry rna-NM_001348894.1_ThermosaccDry cds-NP_001335749.1_ThermosaccDry 99.1 100.0 Verified 1 1 0 False False True False False
VR1 GCA_001738595.1 Bioethanol South America CM005457.1:128795-129268:- gene-YCR006C_VR1 rna-NM_001348894.1_VR1 cds-NP_001335749.1_VR1 99.3 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000004.1:117059-117532:- gene-YCR006C_ZTW1 rna-NM_001348894.1_ZTW1 cds-NP_001335749.1_ZTW1 99.1 100.0 Verified 1 1 0 False False True False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047489.1:147946-148445:- gene-YCR006C_Sparadoxus rna-NM_001348894.1_Sparadoxus cds-NP_001335749.1_Sparadoxus 83.3 99.3 Unannotated 1 1 0 False False True False False

Additional files