YCR001W (YCR001W)

Gene profile

Gene name: YCR001W
Reference locus (S288C): YCR001W
Gene biotype: protein_coding

Description: Uncharacterized protein YCR001W; Putative protein of unknown function; conserved among S. cerevisiae strains; YCR001W is not an essential gene

Top 10 interactors (score): YIL108W (0.898); SLM5 (0.752); ULA1 (0.75); YCP4 (0.67); HAT1 (0.574); ILV6 (0.571); RRP6 (0.461)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005297.1:110394-110708:+ gene-YCR001W_AKU4011 rna-NM_001348893.1_AKU4011 cds-NP_001335748.1_AKU4011 99.6 100.0 Mismatch 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000178.1:35322-35636:- gene-YCR001W_BG1 rna-NM_001348893.1_BG1 cds-NP_001335748.1_BG1 100.0 100.0 Mismatch 1 1 1 True True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005505.1:106208-106522:+ gene-YCR001W_Bruggeman rna-NM_001348893.1_Bruggeman cds-NP_001335748.1_Bruggeman 99.6 100.0 Mismatch 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005521.1:110138-110455:+ gene-YCR001W_CAT1 rna-NM_001348893.1_CAT1 cds-NP_001335748.1_CAT1 98.7 100.0 Mismatch 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005361.1:111043-111357:+ gene-YCR001W_CBS1585 rna-NM_001348893.1_CBS1585 cds-NP_001335748.1_CBS1585 99.6 100.0 Mismatch 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005345.1:115968-116282:+ gene-YCR001W_CBS436 rna-NM_001348893.1_CBS436 cds-NP_001335748.1_CBS436 100.0 100.0 Mismatch 1 1 1 True True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005329.1:98503-98817:+ gene-YCR001W_CBS6412 rna-NM_001348893.1_CBS6412 cds-NP_001335748.1_CBS6412 99.6 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005313.1:110350-110664:+ gene-YCR001W_CBS6413 rna-NM_001348893.1_CBS6413 cds-NP_001335748.1_CBS6413 99.6 100.0 Mismatch 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001524.1:115160-115474:+ gene-YCR001W_CENPK1137D rna-NM_001348893.1_CENPK1137D cds-NP_001335748.1_CENPK1137D 100.0 100.0 Mismatch 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005473.1:108412-108726:+ gene-YCR001W_EthanolRed rna-NM_001348893.1_EthanolRed cds-NP_001335748.1_EthanolRed 99.3 100.0 Mismatch 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005537.1:110710-111024:+ gene-YCR001W_FaliES1 rna-NM_001348893.1_FaliES1 cds-NP_001335748.1_FaliES1 99.3 100.0 Mismatch 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000126.1:24882-25197:+ gene-YCR001W_JAY291 rna-NM_001348893.1_JAY291 cds-NP_001335748.1_JAY291 99.3 100.0 Mismatch 1 1 0 False False False True False
MUCL30387 GCA_001738515.1 Bread Europe CM005409.1:103425-103739:+ gene-YCR001W_MUCL30387 rna-NM_001348893.1_MUCL30387 cds-NP_001335748.1_MUCL30387 99.6 100.0 Mismatch 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005441.1:102980-103295:+ gene-YCR001W_MUCL30388 rna-NM_001348893.1_MUCL30388 cds-NP_001335748.1_MUCL30388 99.6 100.0 Mismatch 1 1 0 False False False True False
MUCL39482 GCA_001738235.1 Sake Asia CM005281.1:111460-111774:+ gene-YCR001W_MUCL39482 rna-NM_001348893.1_MUCL39482 cds-NP_001335748.1_MUCL39482 99.6 100.0 Mismatch 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005425.1:106700-107014:+ gene-YCR001W_MUCL42920 rna-NM_001348893.1_MUCL42920 cds-NP_001335748.1_MUCL42920 99.6 100.0 Mismatch 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011812.1:115317-115631:+ gene-YCR001W_NCIM3186 rna-NM_001348893.1_NCIM3186 cds-NP_001335748.1_NCIM3186 99.0 100.0 Mismatch 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005265.1:111943-112257:+ gene-YCR001W_NCYC1407 rna-NM_001348893.1_NCYC1407 cds-NP_001335748.1_NCYC1407 99.6 100.0 Mismatch 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994142.1:116115-116429:+ gene-YCR001W_PE2H3 rna-NM_001348893.1_PE2H3 cds-NP_001335748.1_PE2H3 100.0 100.0 Mismatch 1 1 1 True True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999874.1:116078-116393:+ gene-YCR001W_PE2H4 rna-NM_001348893.1_PE2H4 cds-NP_001335748.1_PE2H4 99.3 100.0 Mismatch 1 1 0 False False False True False
S288C GCF_000146045.2 Laboratory Not applicable NC_001135.5:115685-115999:+ gene-YCR001W_S288C rna-NM_001348893.1_S288C cds-NP_001335748.1_S288C 100.0 100.0 Mismatch 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000073.1:35334-35649:- gene-YCR001W_SA1 rna-NM_001348893.1_SA1 cds-NP_001335748.1_SA1 99.3 100.0 Mismatch 1 1 0 False False False True False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005489.1:111278-111592:+ gene-YCR001W_ThermosaccDry rna-NM_001348893.1_ThermosaccDry cds-NP_001335748.1_ThermosaccDry 99.3 100.0 Mismatch 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005457.1:121929-122246:+ gene-YCR001W_VR1 rna-NM_001348893.1_VR1 cds-NP_001335748.1_VR1 98.7 100.0 Mismatch 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000004.1:110214-110528:+ gene-YCR001W_ZTW1 rna-NM_001348893.1_ZTW1 cds-NP_001335748.1_ZTW1 99.6 100.0 Mismatch 1 1 1 False True False False False

Additional files