Gene name: YCL048W-A
Reference locus (S288C): YCL048W-A
Gene biotype: protein_coding
Description: Uncharacterized protein YCL048W-A; Putative protein of unknown function; SWAT-GFP and mCherry fusion proteins localize to the cell periphery and vacuole; YCL048W-A has a paralog, YDR524C-B, that arose from the whole genome duplication
Top 10 interactors (score): YDR524C-B (0.897); GRE1 (0.758); YCL021W-A (0.749); HOR7 (0.745); TKL2 (0.733); LIH1 (0.718); DDR2 (0.71); BUD2 (0.679); SIP18 (0.62); YBR230W-A (0.616); PAI3 (0.608); FMP16 (0.608); HBT1 (0.607); GND2 (0.607); SHH3 (0.601); ABM1 (0.592); YBR116C (0.583); HXT5 (0.568); SPO24 (0.566); YKL162C (0.525)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005297.1:42786-43010:+ | gene-YCL048W-A_AKU4011 | rna-NM_001184678.1_AKU4011 | cds-NP_001032573.1_AKU4011 | 92.9 | 93.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000086.1:2816-3055:- | gene-YCL048W-A_BG1 | rna-NM_001184678.1_BG1 | cds-NP_001032573.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005505.1:30637-30876:+ | gene-YCL048W-A_Bruggeman | rna-NM_001184678.1_Bruggeman | cds-NP_001032573.1_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005521.1:42642-42896:+ | gene-YCL048W-A_CAT1 | rna-NM_001184678.1_CAT1 | cds-NP_001032573.1_CAT1 | 94.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005361.1:43470-43709:+ | gene-YCL048W-A_CBS1585 | rna-NM_001184678.1_CBS1585 | cds-NP_001032573.1_CBS1585 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005345.1:42009-42248:+ | gene-YCL048W-A_CBS436 | rna-NM_001184678.1_CBS436 | cds-NP_001032573.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005329.1:31268-31507:+ | gene-YCL048W-A_CBS6412 | rna-NM_001184678.1_CBS6412 | cds-NP_001032573.1_CBS6412 | 99.1 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005313.1:42273-42512:+ | gene-YCL048W-A_CBS6413 | rna-NM_001184678.1_CBS6413 | cds-NP_001032573.1_CBS6413 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001524.1:41062-41301:+ | gene-YCL048W-A_CENPK1137D | rna-NM_001184678.1_CENPK1137D | cds-NP_001032573.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005473.1:41017-41271:+ | gene-YCL048W-A_EthanolRed | rna-NM_001184678.1_EthanolRed | cds-NP_001032573.1_EthanolRed | 93.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005537.1:41782-42036:+ | gene-YCL048W-A_FaliES1 | rna-NM_001184678.1_FaliES1 | cds-NP_001032573.1_FaliES1 | 93.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000225.1:42320-42559:- | gene-YCL048W-A_JAY291 | rna-NM_001184678.1_JAY291 | cds-NP_001032573.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005409.1:29241-29480:+ | gene-YCL048W-A_MUCL30387 | rna-NM_001184678.1_MUCL30387 | cds-NP_001032573.1_MUCL30387 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005441.1:29512-29751:+ | gene-YCL048W-A_MUCL30388 | rna-NM_001184678.1_MUCL30388 | cds-NP_001032573.1_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005281.1:43857-44096:+ | gene-YCL048W-A_MUCL39482 | rna-NM_001184678.1_MUCL39482 | cds-NP_001032573.1_MUCL39482 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005425.1:30031-30270:+ | gene-YCL048W-A_MUCL42920 | rna-NM_001184678.1_MUCL42920 | cds-NP_001032573.1_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011812.1:41120-41359:+ | gene-YCL048W-A_NCIM3186 | rna-NM_001184678.1_NCIM3186 | cds-NP_001032573.1_NCIM3186 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005265.1:44178-44432:+ | gene-YCL048W-A_NCYC1407 | rna-NM_001184678.1_NCYC1407 | cds-NP_001032573.1_NCYC1407 | 93.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994142.1:41949-42188:+ | gene-YCL048W-A_PE2H3 | rna-NM_001184678.1_PE2H3 | cds-NP_001032573.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999874.1:41906-42145:+ | gene-YCL048W-A_PE2H4 | rna-NM_001184678.1_PE2H4 | cds-NP_001032573.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001135.5:41488-41727:+ | gene-YCL048W-A_S288C | rna-NM_001184678.1_S288C | cds-NP_001032573.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000061.1:28616-28855:+ | gene-YCL048W-A_SA1 | rna-NM_001184678.1_SA1 | cds-NP_001032573.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005489.1:42100-42354:+ | gene-YCL048W-A_ThermosaccDry | rna-NM_001184678.1_ThermosaccDry | cds-NP_001032573.1_ThermosaccDry | 93.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005457.1:48433-48672:+ | gene-YCL048W-A_VR1 | rna-NM_001184678.1_VR1 | cds-NP_001032573.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000004.1:42323-42562:+ | gene-YCL048W-A_ZTW1 | rna-NM_001184678.1_ZTW1 | cds-NP_001032573.1_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047489.1:71979-72218:+ | gene-YCL048W-A_Sparadoxus | rna-NM_001184678.1_Sparadoxus | cds-NP_001032573.1_Sparadoxus | 91.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |