Gene name: YCL042W
Reference locus (S288C): YCL042W
Gene biotype: protein_coding
Description: Putative uncharacterized protein ycl042w; Putative protein of unknown function; epitope-tagged protein localizes to the cytoplasm
Top 10 interactors (score): GLK1 (0.947); YCR024C-B (0.944); YCL001W-A (0.913); OCA4 (0.847); PNC1 (0.809); VBA3 (0.76); YCL068C (0.747); TSL1 (0.727); YCL001W-B (0.71); FIG2 (0.707); GSY2 (0.702); YCL049C (0.613); CTO1 (0.61); PGM2 (0.608); TPS1 (0.575); GAD1 (0.538); SRD1 (0.525); RTC3 (0.517); TFS1 (0.508); SOL2 (0.499)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005297.1:51911-52270:+ | gene-YCL042W_AKU4011 | rna-NM_001178687.1_AKU4011 | cds-NP_009889.2_AKU4011 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000198.1:6205-6565:+ | gene-YCL042W_BG1 | rna-NM_001178687.1_BG1 | cds-NP_009889.2_BG1 | 98.8 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005505.1:39726-40085:+ | gene-YCL042W_Bruggeman | rna-NM_001178687.1_Bruggeman | cds-NP_009889.2_Bruggeman | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005521.1:51745-52106:+ | gene-YCL042W_CAT1 | rna-NM_001178687.1_CAT1 | cds-NP_009889.2_CAT1 | 98.6 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005361.1:52636-52995:+ | gene-YCL042W_CBS1585 | rna-NM_001178687.1_CBS1585 | cds-NP_009889.2_CBS1585 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005345.1:51086-51447:+ | gene-YCL042W_CBS436 | rna-NM_001178687.1_CBS436 | cds-NP_009889.2_CBS436 | 98.6 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005329.1:40105-40403:+ | gene-YCL042W_CBS6412 | rna-NM_001178687.1_CBS6412 | cds-NP_009889.2_CBS6412 | 77.3 | 81.3 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005313.1:51418-51776:+ | gene-YCL042W_CBS6413 | rna-NM_001178687.1_CBS6413 | cds-NP_009889.2_CBS6413 | 99.7 | 99.7 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001524.1:50179-50537:+ | gene-YCL042W_CENPK1137D | rna-NM_001178687.1_CENPK1137D | cds-NP_009889.2_CENPK1137D | 99.7 | 99.7 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005473.1:49963-50322:+ | gene-YCL042W_EthanolRed | rna-NM_001178687.1_EthanolRed | cds-NP_009889.2_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005537.1:50918-51276:+ | gene-YCL042W_FaliES1 | rna-NM_001178687.1_FaliES1 | cds-NP_009889.2_FaliES1 | 99.7 | 99.7 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000225.1:33105-33465:- | gene-YCL042W_JAY291 | rna-NM_001178687.1_JAY291 | cds-NP_009889.2_JAY291 | 98.8 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005409.1:38354-38713:+ | gene-YCL042W_MUCL30387 | rna-NM_001178687.1_MUCL30387 | cds-NP_009889.2_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005441.1:38599-38959:+ | gene-YCL042W_MUCL30388 | rna-NM_001178687.1_MUCL30388 | cds-NP_009889.2_MUCL30388 | 98.6 | 100.0 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005281.1:52978-53337:+ | gene-YCL042W_MUCL39482 | rna-NM_001178687.1_MUCL39482 | cds-NP_009889.2_MUCL39482 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005425.1:39121-39483:+ | gene-YCL042W_MUCL42920 | rna-NM_001178687.1_MUCL42920 | cds-NP_009889.2_MUCL42920 | 98.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011812.1:50216-50575:+ | gene-YCL042W_NCIM3186 | rna-NM_001178687.1_NCIM3186 | cds-NP_009889.2_NCIM3186 | 98.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005265.1:53313-53672:+ | gene-YCL042W_NCYC1407 | rna-NM_001178687.1_NCYC1407 | cds-NP_009889.2_NCYC1407 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994142.1:51044-51404:+ | gene-YCL042W_PE2H3 | rna-NM_001178687.1_PE2H3 | cds-NP_009889.2_PE2H3 | 98.8 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999874.1:51001-51361:+ | gene-YCL042W_PE2H4 | rna-NM_001178687.1_PE2H4 | cds-NP_009889.2_PE2H4 | 98.8 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001135.5:50584-50943:+ | gene-YCL042W_S288C | rna-NM_001178687.1_S288C | cds-NP_009889.2_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000061.1:37724-38085:+ | gene-YCL042W_SA1 | rna-NM_001178687.1_SA1 | cds-NP_009889.2_SA1 | 98.6 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005489.1:51235-51593:+ | gene-YCL042W_ThermosaccDry | rna-NM_001178687.1_ThermosaccDry | cds-NP_009889.2_ThermosaccDry | 99.7 | 99.7 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005457.1:57543-57903:+ | gene-YCL042W_VR1 | rna-NM_001178687.1_VR1 | cds-NP_009889.2_VR1 | 98.8 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000004.1:51439-51798:+ | gene-YCL042W_ZTW1 | rna-NM_001178687.1_ZTW1 | cds-NP_009889.2_ZTW1 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047489.1:81039-81395:+ | gene-YCL042W_Sparadoxus | rna-NM_001178687.1_Sparadoxus | cds-NP_009889.2_Sparadoxus | 88.1 | 98.3 | Unannotated | 1 | 1 | 0 | False | False | True | False | False |