Gene name: YCL012C
Reference locus (S288C): YCL012C
Gene biotype: protein_coding
Description: UPF0357 protein YCL012C; Protein of unknown function; SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum and vacuole respectively; orthologs are present in S. bayanus, S. paradoxus and Ashbya gossypii; YCL012C is not an essential gene; Belongs to the UPF0357 family
Top 10 interactors (score): YHL050W-A (0.945); YHL050C (0.897); RCN1 (0.6); GLN3 (0.597); YRR1 (0.45)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005297.1:96029-96500:- | gene-YCL012C_AKU4011 | rna-NM_001184672.1_AKU4011 | cds-NP_976246.1_AKU4011 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000178.1:49544-50015:+ | gene-YCL012C_BG1 | rna-NM_001184672.1_BG1 | cds-NP_976246.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005505.1:90614-91085:- | gene-YCL012C_Bruggeman | rna-NM_001184672.1_Bruggeman | cds-NP_976246.1_Bruggeman | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005521.1:95758-96229:- | gene-YCL012C_CAT1 | rna-NM_001184672.1_CAT1 | cds-NP_976246.1_CAT1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005361.1:96678-97149:- | gene-YCL012C_CBS1585 | rna-NM_001184672.1_CBS1585 | cds-NP_976246.1_CBS1585 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005345.1:101593-102064:- | gene-YCL012C_CBS436 | rna-NM_001184672.1_CBS436 | cds-NP_976246.1_CBS436 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005329.1:84137-84608:- | gene-YCL012C_CBS6412 | rna-NM_001184672.1_CBS6412 | cds-NP_976246.1_CBS6412 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005313.1:95985-96456:- | gene-YCL012C_CBS6413 | rna-NM_001184672.1_CBS6413 | cds-NP_976246.1_CBS6413 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001524.1:100794-101265:- | gene-YCL012C_CENPK1137D | rna-NM_001184672.1_CENPK1137D | cds-NP_976246.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005473.1:94047-94518:- | gene-YCL012C_EthanolRed | rna-NM_001184672.1_EthanolRed | cds-NP_976246.1_EthanolRed | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005537.1:96337-96808:- | gene-YCL012C_FaliES1 | rna-NM_001184672.1_FaliES1 | cds-NP_976246.1_FaliES1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000126.1:10510-10981:- | gene-YCL012C_JAY291 | rna-NM_001184672.1_JAY291 | cds-NP_976246.1_JAY291 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005409.1:89050-89521:- | gene-YCL012C_MUCL30387 | rna-NM_001184672.1_MUCL30387 | cds-NP_976246.1_MUCL30387 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005441.1:88604-89075:- | gene-YCL012C_MUCL30388 | rna-NM_001184672.1_MUCL30388 | cds-NP_976246.1_MUCL30388 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005281.1:97095-97566:- | gene-YCL012C_MUCL39482 | rna-NM_001184672.1_MUCL39482 | cds-NP_976246.1_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005425.1:92330-92801:- | gene-YCL012C_MUCL42920 | rna-NM_001184672.1_MUCL42920 | cds-NP_976246.1_MUCL42920 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011812.1:100949-101420:- | gene-YCL012C_NCIM3186 | rna-NM_001184672.1_NCIM3186 | cds-NP_976246.1_NCIM3186 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005265.1:97577-98048:- | gene-YCL012C_NCYC1407 | rna-NM_001184672.1_NCYC1407 | cds-NP_976246.1_NCYC1407 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994142.1:101745-102216:- | gene-YCL012C_PE2H3 | rna-NM_001184672.1_PE2H3 | cds-NP_976246.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999874.1:101704-102175:- | gene-YCL012C_PE2H4 | rna-NM_001184672.1_PE2H4 | cds-NP_976246.1_PE2H4 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001135.5:101317-101788:- | gene-YCL012C_S288C | rna-NM_001184672.1_S288C | cds-NP_976246.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000073.1:49551-50022:+ | gene-YCL012C_SA1 | rna-NM_001184672.1_SA1 | cds-NP_976246.1_SA1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005489.1:96911-97382:- | gene-YCL012C_ThermosaccDry | rna-NM_001184672.1_ThermosaccDry | cds-NP_976246.1_ThermosaccDry | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005457.1:107551-108022:- | gene-YCL012C_VR1 | rna-NM_001184672.1_VR1 | cds-NP_976246.1_VR1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000004.1:95852-96323:- | gene-YCL012C_ZTW1 | rna-NM_001184672.1_ZTW1 | cds-NP_976246.1_ZTW1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047489.1:126103-126576:- | gene-YCL012C_Sparadoxus | rna-NM_001184672.1_Sparadoxus | cds-NP_976246.1_Sparadoxus | 88.7 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |