YCL002C (YCL002C)

Gene profile

Gene name: YCL002C
Reference locus (S288C): YCL002C
Gene biotype: protein_coding

Description: Putative uncharacterized protein ycl002c; Putative protein of unknown function; YCL002C is not an essential gene

Top 10 interactors (score): Unknown

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005297.1:105525-106392:- gene-YCL002C_AKU4011 rna-NM_001178652.2_AKU4011 cds-NP_009924.4_AKU4011 99.4 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000178.1:39641-40508:+ gene-YCL002C_BG1 rna-NM_001178652.2_BG1 cds-NP_009924.4_BG1 99.8 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005505.1:100110-100977:- gene-YCL002C_Bruggeman rna-NM_001178652.2_Bruggeman cds-NP_009924.4_Bruggeman 99.7 100.0 Verified 1 1 1 True True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005521.1:105260-106127:- gene-YCL002C_CAT1 rna-NM_001178652.2_CAT1 cds-NP_009924.4_CAT1 99.8 100.0 Verified 1 1 1 True True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005361.1:106175-107042:- gene-YCL002C_CBS1585 rna-NM_001178652.2_CBS1585 cds-NP_009924.4_CBS1585 99.4 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005345.1:111091-111958:- gene-YCL002C_CBS436 rna-NM_001178652.2_CBS436 cds-NP_009924.4_CBS436 100.0 100.0 Mismatch 1 1 1 True True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005329.1:93634-94501:- gene-YCL002C_CBS6412 rna-NM_001178652.2_CBS6412 cds-NP_009924.4_CBS6412 99.4 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005313.1:105482-106349:- gene-YCL002C_CBS6413 rna-NM_001178652.2_CBS6413 cds-NP_009924.4_CBS6413 99.4 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001524.1:110283-111150:- gene-YCL002C_CENPK1137D rna-NM_001178652.2_CENPK1137D cds-NP_009924.4_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005473.1:103544-104411:- gene-YCL002C_EthanolRed rna-NM_001178652.2_EthanolRed cds-NP_009924.4_EthanolRed 100.0 100.0 Verified 1 1 1 True True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005537.1:105837-106704:- gene-YCL002C_FaliES1 rna-NM_001178652.2_FaliES1 cds-NP_009924.4_FaliES1 100.0 100.0 Verified 1 1 1 True True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000126.1:20006-20873:- gene-YCL002C_JAY291 rna-NM_001178652.2_JAY291 cds-NP_009924.4_JAY291 100.0 100.0 Verified 1 1 1 True True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005409.1:98548-99415:- gene-YCL002C_MUCL30387 rna-NM_001178652.2_MUCL30387 cds-NP_009924.4_MUCL30387 99.6 100.0 Verified 1 1 1 True True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005441.1:98104-98971:- gene-YCL002C_MUCL30388 rna-NM_001178652.2_MUCL30388 cds-NP_009924.4_MUCL30388 99.6 100.0 Verified 1 1 1 True True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005281.1:106592-107459:- gene-YCL002C_MUCL39482 rna-NM_001178652.2_MUCL39482 cds-NP_009924.4_MUCL39482 99.4 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005425.1:101824-102691:- gene-YCL002C_MUCL42920 rna-NM_001178652.2_MUCL42920 cds-NP_009924.4_MUCL42920 99.4 100.0 Verified 1 1 1 True True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011812.1:110440-111307:- gene-YCL002C_NCIM3186 rna-NM_001178652.2_NCIM3186 cds-NP_009924.4_NCIM3186 99.4 100.0 Verified 1 1 1 True True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005265.1:107074-107941:- gene-YCL002C_NCYC1407 rna-NM_001178652.2_NCYC1407 cds-NP_009924.4_NCYC1407 99.4 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994142.1:111243-112110:- gene-YCL002C_PE2H3 rna-NM_001178652.2_PE2H3 cds-NP_009924.4_PE2H3 99.8 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999874.1:111201-112068:- gene-YCL002C_PE2H4 rna-NM_001178652.2_PE2H4 cds-NP_009924.4_PE2H4 100.0 100.0 Verified 1 1 1 True True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001135.5:110808-111675:- gene-YCL002C_S288C rna-NM_001178652.2_S288C cds-NP_009924.4_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000073.1:39659-40526:+ gene-YCL002C_SA1 rna-NM_001178652.2_SA1 cds-NP_009924.4_SA1 100.0 100.0 Verified 1 1 1 True True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005489.1:106410-107277:- gene-YCL002C_ThermosaccDry rna-NM_001178652.2_ThermosaccDry cds-NP_009924.4_ThermosaccDry 100.0 100.0 Verified 1 1 1 True True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005457.1:117050-117917:- gene-YCL002C_VR1 rna-NM_001178652.2_VR1 cds-NP_009924.4_VR1 100.0 100.0 Verified 1 1 1 True True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000004.1:105349-106216:- gene-YCL002C_ZTW1 rna-NM_001178652.2_ZTW1 cds-NP_009924.4_ZTW1 99.7 100.0 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047489.1:135584-136451:- gene-YCL002C_Sparadoxus rna-NM_001178652.2_Sparadoxus cds-NP_009924.4_Sparadoxus 90.6 100.0 Verified 1 1 1 False True False False False

Additional files