Gene name: YCL001W-A
Reference locus (S288C): YCL001W-A
Gene biotype: protein_coding
Description: Putative protein of unknown function; YCL001W-A gene has similarity to DOM34 and is present in a region duplicated between chromosomes XIV and III; Belongs to the eukaryotic release factor 1 family. Pelota subfamily. Highly divergent
Top 10 interactors (score): YCL042W (0.913); YCR024C-B (0.913); YCL001W-B (0.892); HBS1 (0.766); SKI7 (0.76); SUP35 (0.758); OCA4 (0.748); RLI1 (0.724); YFR057W (0.71); VBA3 (0.695); SKI2 (0.648); YCL068C (0.619); FEN2 (0.569); FIG2 (0.561); SKI3 (0.489); SUP45 (0.476); MAK16 (0.444); TRP3 (0.424); SNU13 (0.406)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005297.1:107790-108251:+ | gene-YCL001W-A_AKU4011 | rna-NM_001184314.1_AKU4011 | cds-NP_009926.1_AKU4011 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000178.1:37775-38236:- | gene-YCL001W-A_BG1 | rna-NM_001184314.1_BG1 | cds-NP_009926.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005505.1:102382-102843:+ | gene-YCL001W-A_Bruggeman | rna-NM_001184314.1_Bruggeman | cds-NP_009926.1_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005521.1:107532-107993:+ | gene-YCL001W-A_CAT1 | rna-NM_001184314.1_CAT1 | cds-NP_009926.1_CAT1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005361.1:108440-108901:+ | gene-YCL001W-A_CBS1585 | rna-NM_001184314.1_CBS1585 | cds-NP_009926.1_CBS1585 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005345.1:113363-113824:+ | gene-YCL001W-A_CBS436 | rna-NM_001184314.1_CBS436 | cds-NP_009926.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005329.1:95899-96360:+ | gene-YCL001W-A_CBS6412 | rna-NM_001184314.1_CBS6412 | cds-NP_009926.1_CBS6412 | 98.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005313.1:107747-108208:+ | gene-YCL001W-A_CBS6413 | rna-NM_001184314.1_CBS6413 | cds-NP_009926.1_CBS6413 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001524.1:112555-113016:+ | gene-YCL001W-A_CENPK1137D | rna-NM_001184314.1_CENPK1137D | cds-NP_009926.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005473.1:105809-106270:+ | gene-YCL001W-A_EthanolRed | rna-NM_001184314.1_EthanolRed | cds-NP_009926.1_EthanolRed | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005537.1:108109-108570:+ | gene-YCL001W-A_FaliES1 | rna-NM_001184314.1_FaliES1 | cds-NP_009926.1_FaliES1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000126.1:22277-22738:+ | gene-YCL001W-A_JAY291 | rna-NM_001184314.1_JAY291 | cds-NP_009926.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005409.1:100820-101281:+ | gene-YCL001W-A_MUCL30387 | rna-NM_001184314.1_MUCL30387 | cds-NP_009926.1_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005441.1:100376-100837:+ | gene-YCL001W-A_MUCL30388 | rna-NM_001184314.1_MUCL30388 | cds-NP_009926.1_MUCL30388 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005281.1:108857-109318:+ | gene-YCL001W-A_MUCL39482 | rna-NM_001184314.1_MUCL39482 | cds-NP_009926.1_MUCL39482 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005425.1:104096-104557:+ | gene-YCL001W-A_MUCL42920 | rna-NM_001184314.1_MUCL42920 | cds-NP_009926.1_MUCL42920 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011812.1:112712-113173:+ | gene-YCL001W-A_NCIM3186 | rna-NM_001184314.1_NCIM3186 | cds-NP_009926.1_NCIM3186 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005265.1:109339-109800:+ | gene-YCL001W-A_NCYC1407 | rna-NM_001184314.1_NCYC1407 | cds-NP_009926.1_NCYC1407 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994142.1:113515-113976:+ | gene-YCL001W-A_PE2H3 | rna-NM_001184314.1_PE2H3 | cds-NP_009926.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999874.1:113473-113934:+ | gene-YCL001W-A_PE2H4 | rna-NM_001184314.1_PE2H4 | cds-NP_009926.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001135.5:113080-113541:+ | gene-YCL001W-A_S288C | rna-NM_001184314.1_S288C | cds-NP_009926.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000073.1:37793-38254:- | gene-YCL001W-A_SA1 | rna-NM_001184314.1_SA1 | cds-NP_009926.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005489.1:108675-109136:+ | gene-YCL001W-A_ThermosaccDry | rna-NM_001184314.1_ThermosaccDry | cds-NP_009926.1_ThermosaccDry | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005457.1:119322-119783:+ | gene-YCL001W-A_VR1 | rna-NM_001184314.1_VR1 | cds-NP_009926.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000004.1:107620-108081:+ | gene-YCL001W-A_ZTW1 | rna-NM_001184314.1_ZTW1 | cds-NP_009926.1_ZTW1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |