Gene name: YCH1
Reference locus (S288C): YGR203W
Gene biotype: protein_coding
Description: CDC25-like phosphatase YCH1; Phosphatase with sequence similarity to Cdc25p; Arr2p and Mih1p; member of the single-domain rhodanese homology superfamily; green fluorescent protein (GFP)-fusion protein localizes to both the cytoplasm and the nucleus
Top 10 interactors (score): DUN1 (0.881); RAD53 (0.881); RDL1 (0.866); CDC14 (0.825); RDL2 (0.82); BMH1 (0.805); BMH2 (0.805); SWE1 (0.799); PTP3 (0.789); CDC5 (0.789); CAK1 (0.756); CDC28 (0.756); PHO85 (0.756); UBP5 (0.753); SDP1 (0.751); GTR2 (0.748); PPQ1 (0.746); IPL1 (0.696); PTP1 (0.685); PTC5 (0.682)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005301.1:870761-871207:+ | gene-YGR203W_AKU4011 | rna-NM_001181332.1_AKU4011 | cds-NP_011719.1_AKU4011 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000021.1:151175-151621:+ | gene-YGR203W_BG1 | rna-NM_001181332.1_BG1 | cds-NP_011719.1_BG1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005509.1:878965-879411:+ | gene-YGR203W_Bruggeman | rna-NM_001181332.1_Bruggeman | cds-NP_011719.1_Bruggeman | 99.1 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005525.1:876959-877405:+ | gene-YGR203W_CAT1 | rna-NM_001181332.1_CAT1 | cds-NP_011719.1_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005365.1:874201-874647:+ | gene-YGR203W_CBS1585 | rna-NM_001181332.1_CBS1585 | cds-NP_011719.1_CBS1585 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005349.1:877557-878003:+ | gene-YGR203W_CBS436 | rna-NM_001181332.1_CBS436 | cds-NP_011719.1_CBS436 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005333.1:865072-865518:+ | gene-YGR203W_CBS6412 | rna-NM_001181332.1_CBS6412 | cds-NP_011719.1_CBS6412 | 99.1 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005317.1:871130-871576:+ | gene-YGR203W_CBS6413 | rna-NM_001181332.1_CBS6413 | cds-NP_011719.1_CBS6413 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001528.1:904963-905409:+ | gene-YGR203W_CENPK1137D | rna-NM_001181332.1_CENPK1137D | cds-NP_011719.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005477.1:859580-860026:+ | gene-YGR203W_EthanolRed | rna-NM_001181332.1_EthanolRed | cds-NP_011719.1_EthanolRed | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005541.1:863971-864417:+ | gene-YGR203W_FaliES1 | rna-NM_001181332.1_FaliES1 | cds-NP_011719.1_FaliES1 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000148.1:21702-22148:+ | gene-YGR203W_JAY291 | rna-NM_001181332.1_JAY291 | cds-NP_011719.1_JAY291 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005413.1:876450-876896:+ | gene-YGR203W_MUCL30387 | rna-NM_001181332.1_MUCL30387 | cds-NP_011719.1_MUCL30387 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005445.1:876134-876580:+ | gene-YGR203W_MUCL30388 | rna-NM_001181332.1_MUCL30388 | cds-NP_011719.1_MUCL30388 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005285.1:869275-869721:+ | gene-YGR203W_MUCL39482 | rna-NM_001181332.1_MUCL39482 | cds-NP_011719.1_MUCL39482 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005429.1:886828-887274:+ | gene-YGR203W_MUCL42920 | rna-NM_001181332.1_MUCL42920 | cds-NP_011719.1_MUCL42920 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011816.1:905237-905683:+ | gene-YGR203W_NCIM3186 | rna-NM_001181332.1_NCIM3186 | cds-NP_011719.1_NCIM3186 | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005269.1:864933-865379:+ | gene-YGR203W_NCYC1407 | rna-NM_001181332.1_NCYC1407 | cds-NP_011719.1_NCYC1407 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994146.1:889543-889989:+ | gene-YGR203W_PE2H3 | rna-NM_001181332.1_PE2H3 | cds-NP_011719.1_PE2H3 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999878.1:894653-895099:+ | gene-YGR203W_PE2H4 | rna-NM_001181332.1_PE2H4 | cds-NP_011719.1_PE2H4 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001139.9:905237-905683:+ | gene-YGR203W_S288C | rna-NM_001181332.1_S288C | cds-NP_011719.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000101.1:26694-27140:+ | gene-YGR203W_SA1 | rna-NM_001181332.1_SA1 | cds-NP_011719.1_SA1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005493.1:884482-884928:+ | gene-YGR203W_ThermosaccDry | rna-NM_001181332.1_ThermosaccDry | cds-NP_011719.1_ThermosaccDry | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005461.1:988971-989417:+ | gene-YGR203W_VR1 | rna-NM_001181332.1_VR1 | cds-NP_011719.1_VR1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000016.1:185930-186376:+ | gene-YGR203W_ZTW1 | rna-NM_001181332.1_ZTW1 | cds-NP_011719.1_ZTW1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047493.1:876459-876905:+ | gene-YGR203W_Sparadoxus | rna-NM_001181332.1_Sparadoxus | cds-NP_011719.1_Sparadoxus | 88.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |