Gene name: YBT1
Reference locus (S288C): YLL048C
Gene biotype: protein_coding
Description: ATP-dependent bile acid permease; Transporter of the ATP-binding cassette (ABC) family; involved in bile acid transport; negative regulator of vacuole fusion; regulates release of lumenal Ca2+ stores; similar to mammalian bile transporters; YBT1 has a paralog, VMR1, that arose from the whole genome duplication
Top 10 interactors (score): GTT2 (0.917); ECM38 (0.907); URE2 (0.902); GTT1 (0.902); GTT3 (0.9); ECM4 (0.9); GTO1 (0.9); PDR18 (0.745); AUS1 (0.697); PDR11 (0.679); PXA2 (0.67); SNQ2 (0.658); ATF2 (0.658); PDR12 (0.644); YDR061W (0.638); STE6 (0.638); RTA1 (0.624); YOR1 (0.617); YCF1 (0.612); PDR15 (0.604)
Homologues (species, bitscore): ABCC1 (Homo sapiens, 754.6); Abcc3 (Mus musculus, 773.5); abcc2 (Danio rerio, 779.2); abcc3 (Xenopus tropicalis, 800.4); MRP (Drosophila melanogaster, 769.2); mrp-2 (Caenorhabditis elegans, 752.7); ABCC1 (Arabidopsis thaliana, 731.1)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005306.1:28434-33419:- | gene-YLL048C_AKU4011 | rna-NM_001181868.1_AKU4011 | cds-NP_013052.1_AKU4011 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000104.1:2585-7570:+ | gene-YLL048C_BG1 | rna-NM_001181868.1_BG1 | cds-NP_013052.1_BG1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005514.1:37785-42770:- | gene-YLL048C_Bruggeman | rna-NM_001181868.1_Bruggeman | cds-NP_013052.1_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005530.1:39311-44296:- | gene-YLL048C_CAT1 | rna-NM_001181868.1_CAT1 | cds-NP_013052.1_CAT1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005370.1:36345-41330:- | gene-YLL048C_CBS1585 | rna-NM_001181868.1_CBS1585 | cds-NP_013052.1_CBS1585 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005354.1:26350-31335:- | gene-YLL048C_CBS436 | rna-NM_001181868.1_CBS436 | cds-NP_013052.1_CBS436 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005338.1:36018-40989:- | gene-YLL048C_CBS6412 | rna-NM_001181868.1_CBS6412 | cds-NP_013052.1_CBS6412 | 94.8 | 98.3 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005322.1:36148-41133:- | gene-YLL048C_CBS6413 | rna-NM_001181868.1_CBS6413 | cds-NP_013052.1_CBS6413 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001533.1:26264-31248:- | gene-YLL048C_CENPK1137D | rna-NM_001181868.1_CENPK1137D | cds-NP_013052.1_CENPK1137D | 99.9 | 99.9 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005482.1:29060-34045:- | gene-YLL048C_EthanolRed | rna-NM_001181868.1_EthanolRed | cds-NP_013052.1_EthanolRed | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005546.1:28381-33366:- | gene-YLL048C_FaliES1 | rna-NM_001181868.1_FaliES1 | cds-NP_013052.1_FaliES1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000073.1:27475-32460:- | gene-YLL048C_JAY291 | rna-NM_001181868.1_JAY291 | cds-NP_013052.1_JAY291 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005418.1:36093-41078:- | gene-YLL048C_MUCL30387 | rna-NM_001181868.1_MUCL30387 | cds-NP_013052.1_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005450.1:40097-45082:- | gene-YLL048C_MUCL30388 | rna-NM_001181868.1_MUCL30388 | cds-NP_013052.1_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005290.1:36346-41331:- | gene-YLL048C_MUCL39482 | rna-NM_001181868.1_MUCL39482 | cds-NP_013052.1_MUCL39482 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005434.1:36657-41642:- | gene-YLL048C_MUCL42920 | rna-NM_001181868.1_MUCL42920 | cds-NP_013052.1_MUCL42920 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011821.1:41254-46239:- | gene-YLL048C_NCIM3186 | rna-NM_001181868.1_NCIM3186 | cds-NP_013052.1_NCIM3186 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005274.1:28224-33209:- | gene-YLL048C_NCYC1407 | rna-NM_001181868.1_NCYC1407 | cds-NP_013052.1_NCYC1407 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994151.1:34899-39884:- | gene-YLL048C_PE2H3 | rna-NM_001181868.1_PE2H3 | cds-NP_013052.1_PE2H3 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999883.1:34704-39689:- | gene-YLL048C_PE2H4 | rna-NM_001181868.1_PE2H4 | cds-NP_013052.1_PE2H4 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001144.5:41280-46265:- | gene-YLL048C_S288C | rna-NM_001181868.1_S288C | cds-NP_013052.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000047.1:34514-39499:- | gene-YLL048C_SA1 | rna-NM_001181868.1_SA1 | cds-NP_013052.1_SA1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005498.1:28885-33870:- | gene-YLL048C_ThermosaccDry | rna-NM_001181868.1_ThermosaccDry | cds-NP_013052.1_ThermosaccDry | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005466.1:42482-47467:- | gene-YLL048C_VR1 | rna-NM_001181868.1_VR1 | cds-NP_013052.1_VR1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000023.1:28203-33188:- | gene-YLL048C_ZTW1 | rna-NM_001181868.1_ZTW1 | cds-NP_013052.1_ZTW1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047498.1:36561-41546:- | gene-YLL048C_Sparadoxus | rna-NM_001181868.1_Sparadoxus | cds-NP_013052.1_Sparadoxus | 91.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |