YBR292C (YBR292C)


Gene profile

Gene name: YBR292C
Reference locus (S288C): YBR292C
Gene biotype: protein_coding

Description: Uncharacterized protein YBR292C; Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; YBR292C is not an essential gene

Top 10 interactors (score): YJL119C (0.895); YBL070C (0.895); YDR286C (0.848); YDR381C-A (0.845); AIM18 (0.844); YBL065W (0.78); YGR161W-C (0.778); AIM11 (0.766); YGR021W (0.749); YOR387C (0.717); YNR040W (0.565); MED11 (0.454); HEM25 (0.45); PUF3 (0.45)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005296.1:769028-769402:- gene-YBR292C_AKU4011 rna-NM_001348892.1_AKU4011 cds-NP_001335747.1_AKU4011 96.8 100.0 Unannotated 1 1 0 False False False False True
BG1 GCA_001932575.1 Bioethanol South America MSHP01000066.1:140025-140366:- gene-YBR292C_BG1 rna-NM_001348892.1_BG1 cds-NP_001335747.1_BG1 91.3 91.9 Unannotated 1 1 0 False False False False True
Bruggeman GCA_001738585.1 Bread Not Applicable CM005504.1:770106-770477:- gene-YBR292C_Bruggeman rna-NM_001348892.1_Bruggeman cds-NP_001335747.1_Bruggeman 100.0 100.0 Verified 1 1 1 True True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005520.1:773859-774229:- gene-YBR292C_CAT1 rna-NM_001348892.1_CAT1 cds-NP_001335747.1_CAT1 97.8 99.4 Unannotated 1 1 0 False False False True False
CBS1585 GCA_001738375.1 Sake Asia CM005360.1:760594-760968:- gene-YBR292C_CBS1585 rna-NM_001348892.1_CBS1585 cds-NP_001335747.1_CBS1585 96.8 100.0 Unannotated 1 1 0 False False False False True
CBS436 GCA_001738355.1 Sake Asia CM005344.1:766987-767358:- gene-YBR292C_CBS436 rna-NM_001348892.1_CBS436 cds-NP_001335747.1_CBS436 99.7 100.0 Mismatch 1 1 1 True True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005328.1:855144-855518:- gene-YBR292C_CBS6412 rna-NM_001348892.1_CBS6412 cds-NP_001335747.1_CBS6412 96.8 100.0 Unannotated 1 1 0 False False False False True
CBS6413 GCA_001738265.1 Sake Asia CM005312.1:766625-766998:- gene-YBR292C_CBS6413 rna-NM_001348892.1_CBS6413 cds-NP_001335747.1_CBS6413 97.3 100.0 Unannotated 1 1 0 False False False True False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001523.1:778601-778972:- gene-YBR292C_CENPK1137D rna-NM_001348892.1_CENPK1137D cds-NP_001335747.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005472.1:892061-892435:- gene-YBR292C_EthanolRed rna-NM_001348892.1_EthanolRed cds-NP_001335747.1_EthanolRed 96.8 100.0 Unannotated 1 1 0 False False False False True
FaliES1 GCA_001738715.1 Bioethanol Asia CM005536.1:785408-785782:- gene-YBR292C_FaliES1 rna-NM_001348892.1_FaliES1 cds-NP_001335747.1_FaliES1 96.8 100.0 Unannotated 1 1 0 False False False False True
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000067.1:18397-18767:+ gene-YBR292C_JAY291 rna-NM_001348892.1_JAY291 cds-NP_001335747.1_JAY291 99.4 99.7 Verified 1 1 0 False False False True False
MUCL30387 GCA_001738515.1 Bread Europe CM005408.1:772171-772547:- gene-YBR292C_MUCL30387 rna-NM_001348892.1_MUCL30387 cds-NP_001335747.1_MUCL30387 96.8 100.0 Unannotated 1 1 0 False False False True False
MUCL30388 GCA_001738495.1 Bread Europe CM005440.1:789507-789878:- gene-YBR292C_MUCL30388 rna-NM_001348892.1_MUCL30388 cds-NP_001335747.1_MUCL30388 99.7 100.0 Verified 1 1 1 True True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005280.1:758901-759275:- gene-YBR292C_MUCL39482 rna-NM_001348892.1_MUCL39482 cds-NP_001335747.1_MUCL39482 96.8 100.0 Unannotated 1 1 0 False False False False True
MUCL42920 GCA_001738485.1 Bread Europe CM005424.1:768717-769087:- gene-YBR292C_MUCL42920 rna-NM_001348892.1_MUCL42920 cds-NP_001335747.1_MUCL42920 99.7 99.7 Verified 1 1 0 False False False True False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011811.1:784499-784870:- gene-YBR292C_NCIM3186 rna-NM_001348892.1_NCIM3186 cds-NP_001335747.1_NCIM3186 97.3 100.0 Unannotated 1 1 0 False False False False True
NCYC1407 GCA_001738225.1 Sake Asia CM005264.1:760790-761164:- gene-YBR292C_NCYC1407 rna-NM_001348892.1_NCYC1407 cds-NP_001335747.1_NCYC1407 96.8 100.0 Unannotated 1 1 0 False False False False True
PE2H3 GCA_905220325.1 Bioethanol South America HG994141.1:783885-784256:- gene-YBR292C_PE2H3 rna-NM_001348892.1_PE2H3 cds-NP_001335747.1_PE2H3 99.7 100.0 Verified 1 1 1 True True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999873.1:781561-781932:- gene-YBR292C_PE2H4 rna-NM_001348892.1_PE2H4 cds-NP_001335747.1_PE2H4 99.7 100.0 Verified 1 1 1 True True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001134.8:784702-785073:- gene-YBR292C_S288C rna-NM_001348892.1_S288C cds-NP_001335747.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000019.1:139841-140212:- gene-YBR292C_SA1 rna-NM_001348892.1_SA1 cds-NP_001335747.1_SA1 99.4 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005488.1:784400-784774:- gene-YBR292C_ThermosaccDry rna-NM_001348892.1_ThermosaccDry cds-NP_001335747.1_ThermosaccDry 96.8 100.0 Unannotated 1 1 0 False False False False True
VR1 GCA_001738595.1 Bioethanol South America CM005456.1:764585-764955:- gene-YBR292C_VR1 rna-NM_001348892.1_VR1 cds-NP_001335747.1_VR1 99.7 99.7 Verified 1 1 0 False False False True False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000003.1:757218-757589:- gene-YBR292C_ZTW1 rna-NM_001348892.1_ZTW1 cds-NP_001335747.1_ZTW1 97.0 99.7 Unannotated 1 1 0 False False False False True

Additional files