Gene name: YBR197C
Reference locus (S288C): YBR197C
Gene biotype: protein_coding
Description: Uncharacterized protein YBR197C; Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and nucleus; YBR197C is not an essential gene; relative distribution to the nucleus increases upon DNA replication stress; YBR197C has a paralog, YPL077C, that arose from the whole genome duplication
Top 10 interactors (score): MTC2 (0.848); DLT1 (0.845); MAY24 (0.815); YBR209W (0.811); MTC4 (0.779); YBR196C-A (0.769); AIM4 (0.756); KTR4 (0.748); YAR035C-A (0.746); TAF5 (0.744); COS111 (0.716); ERV15 (0.711); MTC3 (0.71); DER1 (0.692); YUR1 (0.671); MED8 (0.619); KTR1 (0.618); PGI1 (0.615); PRP4 (0.611); KTR2 (0.61)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005296.1:598573-599226:- | gene-YBR197C_AKU4011 | rna-NM_001178545.1_AKU4011 | cds-NP_009756.1_AKU4011 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000179.1:588574-589227:- | gene-YBR197C_BG1 | rna-NM_001178545.1_BG1 | cds-NP_009756.1_BG1 | 98.9 | 100.0 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005518.1:404429-405082:- | gene-YBR197C_Bruggeman | rna-NM_001178545.1_Bruggeman | cds-NP_009756.1_Bruggeman | 98.9 | 100.0 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005520.1:603835-604488:- | gene-YBR197C_CAT1 | rna-NM_001178545.1_CAT1 | cds-NP_009756.1_CAT1 | 99.0 | 100.0 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005360.1:590354-591007:- | gene-YBR197C_CBS1585 | rna-NM_001178545.1_CBS1585 | cds-NP_009756.1_CBS1585 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005344.1:597900-598553:- | gene-YBR197C_CBS436 | rna-NM_001178545.1_CBS436 | cds-NP_009756.1_CBS436 | 98.9 | 100.0 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005328.1:686963-687616:- | gene-YBR197C_CBS6412 | rna-NM_001178545.1_CBS6412 | cds-NP_009756.1_CBS6412 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005312.1:596160-596813:- | gene-YBR197C_CBS6413 | rna-NM_001178545.1_CBS6413 | cds-NP_009756.1_CBS6413 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001523.1:608977-609630:- | gene-YBR197C_CENPK1137D | rna-NM_001178545.1_CENPK1137D | cds-NP_009756.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005472.1:723729-724382:- | gene-YBR197C_EthanolRed | rna-NM_001178545.1_EthanolRed | cds-NP_009756.1_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005536.1:614640-615293:- | gene-YBR197C_FaliES1 | rna-NM_001178545.1_FaliES1 | cds-NP_009756.1_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000023.1:8242-8895:- | gene-YBR197C_JAY291 | rna-NM_001178545.1_JAY291 | cds-NP_009756.1_JAY291 | 98.9 | 100.0 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005408.1:603108-603761:- | gene-YBR197C_MUCL30387 | rna-NM_001178545.1_MUCL30387 | cds-NP_009756.1_MUCL30387 | 99.0 | 100.0 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005440.1:620185-620838:- | gene-YBR197C_MUCL30388 | rna-NM_001178545.1_MUCL30388 | cds-NP_009756.1_MUCL30388 | 98.9 | 100.0 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005280.1:588727-589380:- | gene-YBR197C_MUCL39482 | rna-NM_001178545.1_MUCL39482 | cds-NP_009756.1_MUCL39482 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005424.1:598148-598801:- | gene-YBR197C_MUCL42920 | rna-NM_001178545.1_MUCL42920 | cds-NP_009756.1_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011811.1:615000-615653:- | gene-YBR197C_NCIM3186 | rna-NM_001178545.1_NCIM3186 | cds-NP_009756.1_NCIM3186 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005264.1:590835-591488:- | gene-YBR197C_NCYC1407 | rna-NM_001178545.1_NCYC1407 | cds-NP_009756.1_NCYC1407 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994141.1:603446-604099:- | gene-YBR197C_PE2H3 | rna-NM_001178545.1_PE2H3 | cds-NP_009756.1_PE2H3 | 98.9 | 100.0 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999873.1:601122-601775:- | gene-YBR197C_PE2H4 | rna-NM_001178545.1_PE2H4 | cds-NP_009756.1_PE2H4 | 98.9 | 100.0 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001134.8:615203-615856:- | gene-YBR197C_S288C | rna-NM_001178545.1_S288C | cds-NP_009756.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000080.1:22896-23549:- | gene-YBR197C_SA1 | rna-NM_001178545.1_SA1 | cds-NP_009756.1_SA1 | 98.9 | 100.0 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005488.1:613650-614303:- | gene-YBR197C_ThermosaccDry | rna-NM_001178545.1_ThermosaccDry | cds-NP_009756.1_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005456.1:594821-595474:- | gene-YBR197C_VR1 | rna-NM_001178545.1_VR1 | cds-NP_009756.1_VR1 | 99.3 | 100.0 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000003.1:588266-588919:- | gene-YBR197C_ZTW1 | rna-NM_001178545.1_ZTW1 | cds-NP_009756.1_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047488.1:630910-631563:- | gene-YBR197C_Sparadoxus | rna-NM_001178545.1_Sparadoxus | cds-NP_009756.1_Sparadoxus | 85.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |