YBR137W (YBR137W)


Gene profile

Gene name: YBR137W
Reference locus (S288C): YBR137W
Gene biotype: protein_coding

Description: UPF0303 protein YBR137W; Protein with a role in ER delivery of tail-anchored membrane proteins; interacts with Sgt2p; binds to the TRC complex, which inserts proteins into the ER membrane; interacts with Msn5p karyopherin; YBR137W is not an essential gene; Belongs to the UPF0303 family

Top 10 interactors (score): SGT2 (0.998); MDY2 (0.993); GET4 (0.986); HSP104 (0.912); YDJ1 (0.908); GET3 (0.813); YDL026W (0.813); YDR249C (0.813); SND1 (0.76); ENV10 (0.746); YJR085C (0.715); KAP120 (0.715); YBR144C (0.696); APD1 (0.671); BMT2 (0.65); GET1 (0.617); PHO88 (0.564); YBR099C (0.548); MSN5 (0.485); CKS1 (0.477)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005296.1:495930-496469:+ gene-YBR137W_AKU4011 rna-NM_001178485.2_AKU4011 cds-NP_009695.2_AKU4011 99.6 100.0 Verified 1 1 1 True True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000179.1:486499-487038:+ gene-YBR137W_BG1 rna-NM_001178485.2_BG1 cds-NP_009695.2_BG1 99.6 100.0 Verified 1 1 1 True True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005504.1:497735-498274:+ gene-YBR137W_Bruggeman rna-NM_001178485.2_Bruggeman cds-NP_009695.2_Bruggeman 99.8 100.0 Verified 1 1 1 True True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005534.1:393075-393614:+ gene-YBR137W_CAT1 rna-NM_001178485.2_CAT1 cds-NP_009695.2_CAT1 99.6 100.0 Verified 1 1 1 True True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005360.1:487710-488249:+ gene-YBR137W_CBS1585 rna-NM_001178485.2_CBS1585 cds-NP_009695.2_CBS1585 99.4 100.0 Verified 1 1 1 True True False False False
CBS436 GCA_001738355.1 Sake Asia CM005344.1:495822-496361:+ gene-YBR137W_CBS436 rna-NM_001178485.2_CBS436 cds-NP_009695.2_CBS436 99.6 100.0 Mismatch 1 1 1 True True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005328.1:585576-586115:+ gene-YBR137W_CBS6412 rna-NM_001178485.2_CBS6412 cds-NP_009695.2_CBS6412 99.6 100.0 Mismatch 1 1 1 True True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005312.1:493345-493884:+ gene-YBR137W_CBS6413 rna-NM_001178485.2_CBS6413 cds-NP_009695.2_CBS6413 99.6 100.0 Verified 1 1 1 True True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001523.1:506814-507353:+ gene-YBR137W_CENPK1137D rna-NM_001178485.2_CENPK1137D cds-NP_009695.2_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005472.1:621952-622491:+ gene-YBR137W_EthanolRed rna-NM_001178485.2_EthanolRed cds-NP_009695.2_EthanolRed 99.6 100.0 Verified 1 1 1 True True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005536.1:511964-512503:+ gene-YBR137W_FaliES1 rna-NM_001178485.2_FaliES1 cds-NP_009695.2_FaliES1 99.6 100.0 Verified 1 1 1 True True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000444.1:35422-35961:+ gene-YBR137W_JAY291 rna-NM_001178485.2_JAY291 cds-NP_009695.2_JAY291 99.6 100.0 Verified 1 1 1 True True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005408.1:500609-501148:+ gene-YBR137W_MUCL30387 rna-NM_001178485.2_MUCL30387 cds-NP_009695.2_MUCL30387 99.6 100.0 Verified 1 1 1 True True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005440.1:499899-500438:+ gene-YBR137W_MUCL30388 rna-NM_001178485.2_MUCL30388 cds-NP_009695.2_MUCL30388 100.0 100.0 Verified 1 1 1 True True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005280.1:486097-486636:+ gene-YBR137W_MUCL39482 rna-NM_001178485.2_MUCL39482 cds-NP_009695.2_MUCL39482 99.4 100.0 Verified 1 1 1 True True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005424.1:496001-496540:+ gene-YBR137W_MUCL42920 rna-NM_001178485.2_MUCL42920 cds-NP_009695.2_MUCL42920 100.0 100.0 Verified 1 1 1 True True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011811.1:512841-513380:+ gene-YBR137W_NCIM3186 rna-NM_001178485.2_NCIM3186 cds-NP_009695.2_NCIM3186 99.6 100.0 Verified 1 1 1 True True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005264.1:488636-489175:+ gene-YBR137W_NCYC1407 rna-NM_001178485.2_NCYC1407 cds-NP_009695.2_NCYC1407 99.6 100.0 Verified 1 1 1 True True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994141.1:501268-501807:+ gene-YBR137W_PE2H3 rna-NM_001178485.2_PE2H3 cds-NP_009695.2_PE2H3 99.6 100.0 Verified 1 1 1 True True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999873.1:498944-499483:+ gene-YBR137W_PE2H4 rna-NM_001178485.2_PE2H4 cds-NP_009695.2_PE2H4 99.6 100.0 Verified 1 1 1 True True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001134.8:513044-513583:+ gene-YBR137W_S288C rna-NM_001178485.2_S288C cds-NP_009695.2_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000032.1:34225-34764:+ gene-YBR137W_SA1 rna-NM_001178485.2_SA1 cds-NP_009695.2_SA1 99.6 100.0 Verified 1 1 1 True True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005488.1:510977-511516:+ gene-YBR137W_ThermosaccDry rna-NM_001178485.2_ThermosaccDry cds-NP_009695.2_ThermosaccDry 99.6 100.0 Verified 1 1 1 True True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005456.1:492474-493013:+ gene-YBR137W_VR1 rna-NM_001178485.2_VR1 cds-NP_009695.2_VR1 99.6 100.0 Verified 1 1 1 True True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000003.1:486122-486661:+ gene-YBR137W_ZTW1 rna-NM_001178485.2_ZTW1 cds-NP_009695.2_ZTW1 99.4 100.0 Verified 1 1 1 True True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047488.1:523341-523880:+ gene-YBR137W_Sparadoxus rna-NM_001178485.2_Sparadoxus cds-NP_009695.2_Sparadoxus 91.6 100.0 Verified 1 1 1 False True False False False

Additional files