YBR090C (YBR090C)

Gene profile

Gene name: YBR090C
Reference locus (S288C): YBR090C
Gene biotype: protein_coding

Description: Uncharacterized protein YBR090C; Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and nucleus

Top 10 interactors (score): Unknown

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005296.1:408701-409425:- gene-YBR090C_AKU4011 rna-NM_001178438.4_AKU4011 cds-NP_009648.4_AKU4011 99.4 99.7 Mismatch 1 1 0 False False False True False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000179.1:399738-400463:- gene-YBR090C_BG1 rna-NM_001178438.4_BG1 cds-NP_009648.4_BG1 99.7 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005504.1:410276-411001:- gene-YBR090C_Bruggeman rna-NM_001178438.4_Bruggeman cds-NP_009648.4_Bruggeman 99.7 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005520.1:413249-413974:- gene-YBR090C_CAT1 rna-NM_001178438.4_CAT1 cds-NP_009648.4_CAT1 99.7 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005360.1:400986-401710:- gene-YBR090C_CBS1585 rna-NM_001178438.4_CBS1585 cds-NP_009648.4_CBS1585 99.4 99.7 Mismatch 1 1 0 False False False True False
CBS436 GCA_001738355.1 Sake Asia CM005344.1:409107-409832:- gene-YBR090C_CBS436 rna-NM_001178438.4_CBS436 cds-NP_009648.4_CBS436 99.7 100.0 Unannotated 1 1 0 False False False False True
CBS6412 GCA_001738345.1 Sake Asia CM005328.1:499215-499939:- gene-YBR090C_CBS6412 rna-NM_001178438.4_CBS6412 cds-NP_009648.4_CBS6412 99.4 99.7 Mismatch 1 1 0 False False False True False
CBS6413 GCA_001738265.1 Sake Asia CM005312.1:406126-406850:- gene-YBR090C_CBS6413 rna-NM_001178438.4_CBS6413 cds-NP_009648.4_CBS6413 99.1 99.7 Mismatch 1 1 0 False False False True False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001523.1:420085-420810:- gene-YBR090C_CENPK1137D rna-NM_001178438.4_CENPK1137D cds-NP_009648.4_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005472.1:535493-536218:- gene-YBR090C_EthanolRed rna-NM_001178438.4_EthanolRed cds-NP_009648.4_EthanolRed 99.7 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005536.1:424776-425501:- gene-YBR090C_FaliES1 rna-NM_001178438.4_FaliES1 cds-NP_009648.4_FaliES1 99.7 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000013.1:1679-2405:+ gene-YBR090C_JAY291 rna-NM_001178438.4_JAY291 cds-NP_009648.4_JAY291 98.3 99.7 Unannotated 1 1 0 False False False True False
MUCL30387 GCA_001738515.1 Bread Europe CM005408.1:412513-413238:- gene-YBR090C_MUCL30387 rna-NM_001178438.4_MUCL30387 cds-NP_009648.4_MUCL30387 99.7 100.0 Unannotated 1 1 0 False False False False True
MUCL30388 GCA_001738495.1 Bread Europe CM005440.1:411508-412233:- gene-YBR090C_MUCL30388 rna-NM_001178438.4_MUCL30388 cds-NP_009648.4_MUCL30388 99.7 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005280.1:400977-401702:- gene-YBR090C_MUCL39482 rna-NM_001178438.4_MUCL39482 cds-NP_009648.4_MUCL39482 99.7 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005424.1:408190-408915:- gene-YBR090C_MUCL42920 rna-NM_001178438.4_MUCL42920 cds-NP_009648.4_MUCL42920 100.0 100.0 Verified 1 1 1 True True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011811.1:426130-426855:- gene-YBR090C_NCIM3186 rna-NM_001178438.4_NCIM3186 cds-NP_009648.4_NCIM3186 99.7 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005264.1:401909-402633:- gene-YBR090C_NCYC1407 rna-NM_001178438.4_NCYC1407 cds-NP_009648.4_NCYC1407 99.4 99.7 Mismatch 1 1 0 False False False True False
PE2H3 GCA_905220325.1 Bioethanol South America HG994141.1:414525-415251:- gene-YBR090C_PE2H3 rna-NM_001178438.4_PE2H3 cds-NP_009648.4_PE2H3 98.6 99.7 Unannotated 1 1 0 False False False True False
PE2H4 GCA_905220315.1 Bioethanol South America LR999873.1:412201-412927:- gene-YBR090C_PE2H4 rna-NM_001178438.4_PE2H4 cds-NP_009648.4_PE2H4 98.6 99.7 Unannotated 1 1 0 False False False True False
S288C GCF_000146045.2 Laboratory Not applicable NC_001134.8:426333-427058:- gene-YBR090C_S288C rna-NM_001178438.4_S288C cds-NP_009648.4_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000017.1:50647-51372:+ gene-YBR090C_SA1 rna-NM_001178438.4_SA1 cds-NP_009648.4_SA1 99.4 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005488.1:423783-424508:- gene-YBR090C_ThermosaccDry rna-NM_001178438.4_ThermosaccDry cds-NP_009648.4_ThermosaccDry 99.7 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005456.1:405787-406513:- gene-YBR090C_VR1 rna-NM_001178438.4_VR1 cds-NP_009648.4_VR1 98.9 99.7 Unannotated 1 1 0 False False False True False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000003.1:399448-400172:- gene-YBR090C_ZTW1 rna-NM_001178438.4_ZTW1 cds-NP_009648.4_ZTW1 99.1 99.7 Mismatch 1 1 0 False False False True False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047488.1:436328-437047:- gene-YBR090C_Sparadoxus rna-NM_001178438.4_Sparadoxus cds-NP_009648.4_Sparadoxus 92.7 98.6 Unannotated 1 1 0 False False False True False

Additional files