Gene name: YBR085C-A
Reference locus (S288C): YBR085C-A
Gene biotype: protein_coding
Description: Uncharacterized protein YBR085C-A; Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and to the nucleus; protein abundance increases in response to DNA replication stress
Top 10 interactors (score): ALG7 (0.921); PRE7 (0.823); PRE8 (0.746); TFS1 (0.73); MSC1 (0.73); PRE5 (0.697); SCO1 (0.671); YHR138C (0.607); ATG8 (0.604); CUP2 (0.599); UBI4 (0.595); DCS2 (0.583); TMC1 (0.572); UMP1 (0.57); NQM1 (0.543); GPG1 (0.539); PRX1 (0.538); DDR2 (0.479); SSE2 (0.478); YJL144W (0.431)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005296.1:401280-401537:- | gene-YBR085C-A_AKU4011 | rna-NM_001184443.1_AKU4011 | cds-NP_061491.1_AKU4011 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000179.1:392321-392578:- | gene-YBR085C-A_BG1 | rna-NM_001184443.1_BG1 | cds-NP_061491.1_BG1 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005504.1:402855-403112:- | gene-YBR085C-A_Bruggeman | rna-NM_001184443.1_Bruggeman | cds-NP_061491.1_Bruggeman | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005520.1:405837-406094:- | gene-YBR085C-A_CAT1 | rna-NM_001184443.1_CAT1 | cds-NP_061491.1_CAT1 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005360.1:393565-393822:- | gene-YBR085C-A_CBS1585 | rna-NM_001184443.1_CBS1585 | cds-NP_061491.1_CBS1585 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005344.1:401670-401927:- | gene-YBR085C-A_CBS436 | rna-NM_001184443.1_CBS436 | cds-NP_061491.1_CBS436 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005328.1:491794-492051:- | gene-YBR085C-A_CBS6412 | rna-NM_001184443.1_CBS6412 | cds-NP_061491.1_CBS6412 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005312.1:398705-398962:- | gene-YBR085C-A_CBS6413 | rna-NM_001184443.1_CBS6413 | cds-NP_061491.1_CBS6413 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001523.1:412659-412916:- | gene-YBR085C-A_CENPK1137D | rna-NM_001184443.1_CENPK1137D | cds-NP_061491.1_CENPK1137D | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005472.1:528071-528328:- | gene-YBR085C-A_EthanolRed | rna-NM_001184443.1_EthanolRed | cds-NP_061491.1_EthanolRed | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005536.1:417354-417611:- | gene-YBR085C-A_FaliES1 | rna-NM_001184443.1_FaliES1 | cds-NP_061491.1_FaliES1 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000013.1:9585-9842:+ | gene-YBR085C-A_JAY291 | rna-NM_001184443.1_JAY291 | cds-NP_061491.1_JAY291 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005408.1:405092-405349:- | gene-YBR085C-A_MUCL30387 | rna-NM_001184443.1_MUCL30387 | cds-NP_061491.1_MUCL30387 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005440.1:404087-404344:- | gene-YBR085C-A_MUCL30388 | rna-NM_001184443.1_MUCL30388 | cds-NP_061491.1_MUCL30388 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005280.1:393556-393813:- | gene-YBR085C-A_MUCL39482 | rna-NM_001184443.1_MUCL39482 | cds-NP_061491.1_MUCL39482 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005424.1:400769-401026:- | gene-YBR085C-A_MUCL42920 | rna-NM_001184443.1_MUCL42920 | cds-NP_061491.1_MUCL42920 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011811.1:418704-418961:- | gene-YBR085C-A_NCIM3186 | rna-NM_001184443.1_NCIM3186 | cds-NP_061491.1_NCIM3186 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005264.1:394488-394745:- | gene-YBR085C-A_NCYC1407 | rna-NM_001184443.1_NCYC1407 | cds-NP_061491.1_NCYC1407 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994141.1:407088-407345:- | gene-YBR085C-A_PE2H3 | rna-NM_001184443.1_PE2H3 | cds-NP_061491.1_PE2H3 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999873.1:404764-405021:- | gene-YBR085C-A_PE2H4 | rna-NM_001184443.1_PE2H4 | cds-NP_061491.1_PE2H4 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001134.8:418907-419164:- | gene-YBR085C-A_S288C | rna-NM_001184443.1_S288C | cds-NP_061491.1_S288C | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000017.1:58526-58783:+ | gene-YBR085C-A_SA1 | rna-NM_001184443.1_SA1 | cds-NP_061491.1_SA1 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005488.1:416361-416618:- | gene-YBR085C-A_ThermosaccDry | rna-NM_001184443.1_ThermosaccDry | cds-NP_061491.1_ThermosaccDry | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005456.1:398349-398606:- | gene-YBR085C-A_VR1 | rna-NM_001184443.1_VR1 | cds-NP_061491.1_VR1 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000003.1:392027-392284:- | gene-YBR085C-A_ZTW1 | rna-NM_001184443.1_ZTW1 | cds-NP_061491.1_ZTW1 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047488.1:428916-429173:- | gene-YBR085C-A_Sparadoxus | rna-NM_001184443.1_Sparadoxus | cds-NP_061491.1_Sparadoxus | 92.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |