Gene name: YBR053C
Reference locus (S288C): YBR053C
Gene biotype: protein_coding
Description: Uncharacterized protein YBR053C; Putative protein of unknown function; induced by cell wall perturbation
Top 10 interactors (score): YBR056W (0.918); FUN14 (0.909); ARA1 (0.904); RFS1 (0.895); PRX1 (0.8); GRE3 (0.796); YRO2 (0.734); YBR139W (0.731); SYN8 (0.699); SEC16 (0.695); TFS1 (0.666); PNC1 (0.647); GAD1 (0.646); NNR1 (0.63); UIP4 (0.62); LYS20 (0.615); DCS1 (0.608); YDR248C (0.586); NOP53 (0.567); SOL4 (0.558)
Homologues (species, bitscore): RGN (Homo sapiens, 51.2); Rgn (Mus musculus, 52.0); rgn (Danio rerio, 59.7); rgn (Xenopus tropicalis, 55.5)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005296.1:322105-323181:- | gene-YBR053C_AKU4011 | rna-NM_001178401.1_AKU4011 | cds-NP_009609.1_AKU4011 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000179.1:312275-313351:- | gene-YBR053C_BG1 | rna-NM_001178401.1_BG1 | cds-NP_009609.1_BG1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005504.1:322845-323921:- | gene-YBR053C_Bruggeman | rna-NM_001178401.1_Bruggeman | cds-NP_009609.1_Bruggeman | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005520.1:326530-327606:- | gene-YBR053C_CAT1 | rna-NM_001178401.1_CAT1 | cds-NP_009609.1_CAT1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005360.1:314402-315478:- | gene-YBR053C_CBS1585 | rna-NM_001178401.1_CBS1585 | cds-NP_009609.1_CBS1585 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005344.1:322416-323492:- | gene-YBR053C_CBS436 | rna-NM_001178401.1_CBS436 | cds-NP_009609.1_CBS436 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005328.1:412618-413694:- | gene-YBR053C_CBS6412 | rna-NM_001178401.1_CBS6412 | cds-NP_009609.1_CBS6412 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005312.1:319517-320593:- | gene-YBR053C_CBS6413 | rna-NM_001178401.1_CBS6413 | cds-NP_009609.1_CBS6413 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001523.1:333435-334511:- | gene-YBR053C_CENPK1137D | rna-NM_001178401.1_CENPK1137D | cds-NP_009609.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005472.1:448880-449956:- | gene-YBR053C_EthanolRed | rna-NM_001178401.1_EthanolRed | cds-NP_009609.1_EthanolRed | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005536.1:338159-339235:- | gene-YBR053C_FaliES1 | rna-NM_001178401.1_FaliES1 | cds-NP_009609.1_FaliES1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000209.1:6019-7095:- | gene-YBR053C_JAY291 | rna-NM_001178401.1_JAY291 | cds-NP_009609.1_JAY291 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005408.1:324469-325545:- | gene-YBR053C_MUCL30387 | rna-NM_001178401.1_MUCL30387 | cds-NP_009609.1_MUCL30387 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005440.1:324253-325329:- | gene-YBR053C_MUCL30388 | rna-NM_001178401.1_MUCL30388 | cds-NP_009609.1_MUCL30388 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005280.1:314390-315466:- | gene-YBR053C_MUCL39482 | rna-NM_001178401.1_MUCL39482 | cds-NP_009609.1_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005424.1:321594-322670:- | gene-YBR053C_MUCL42920 | rna-NM_001178401.1_MUCL42920 | cds-NP_009609.1_MUCL42920 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011811.1:339472-340548:- | gene-YBR053C_NCIM3186 | rna-NM_001178401.1_NCIM3186 | cds-NP_009609.1_NCIM3186 | 90.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005264.1:315300-316376:- | gene-YBR053C_NCYC1407 | rna-NM_001178401.1_NCYC1407 | cds-NP_009609.1_NCYC1407 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994141.1:327481-328557:- | gene-YBR053C_PE2H3 | rna-NM_001178401.1_PE2H3 | cds-NP_009609.1_PE2H3 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999873.1:325157-326233:- | gene-YBR053C_PE2H4 | rna-NM_001178401.1_PE2H4 | cds-NP_009609.1_PE2H4 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001134.8:339675-340751:- | gene-YBR053C_S288C | rna-NM_001178401.1_S288C | cds-NP_009609.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000017.1:136786-137862:+ | gene-YBR053C_SA1 | rna-NM_001178401.1_SA1 | cds-NP_009609.1_SA1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005488.1:337170-338246:- | gene-YBR053C_ThermosaccDry | rna-NM_001178401.1_ThermosaccDry | cds-NP_009609.1_ThermosaccDry | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005456.1:319083-320159:- | gene-YBR053C_VR1 | rna-NM_001178401.1_VR1 | cds-NP_009609.1_VR1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000003.1:312898-313974:- | gene-YBR053C_ZTW1 | rna-NM_001178401.1_ZTW1 | cds-NP_009609.1_ZTW1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047488.1:349470-350546:- | gene-YBR053C_Sparadoxus | rna-NM_001178401.1_Sparadoxus | cds-NP_009609.1_Sparadoxus | 89.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |