Gene name: YBR013C
Reference locus (S288C): YBR013C
Gene biotype: protein_coding
Description: Putative protein of unknown function; haploid deletion mutant exhibits synthetic phenotype with alpha-synuclein; SWAT-GFP fusion protein localizes to the endoplasmic reticulum while mCherry fusion protein localizes to both the endoplasmic reticulum and vacuole
Top 10 interactors (score): YMR103C (0.843); PMU1 (0.766); RMA1 (0.75); POA1 (0.745); YMR102C (0.744); SSH4 (0.71); YPK1 (0.708); YBR016W (0.7); SRT1 (0.695); OLA1 (0.692); SCO2 (0.618); SHR3 (0.617); SNM1 (0.599); PGM1 (0.591); GRX7 (0.575); MNN2 (0.571); YPK2 (0.526); RRN3 (0.526); KAP104 (0.499); YDR476C (0.497)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005296.1:247958-248347:- | gene-YBR013C_AKU4011 | rna-NM_001178361.1_AKU4011 | cds-NP_009569.1_AKU4011 | 99.2 | 100.0 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000179.1:238063-238452:- | gene-YBR013C_BG1 | rna-NM_001178361.1_BG1 | cds-NP_009569.1_BG1 | 99.2 | 100.0 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005504.1:248660-249049:- | gene-YBR013C_Bruggeman | rna-NM_001178361.1_Bruggeman | cds-NP_009569.1_Bruggeman | 99.2 | 100.0 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005520.1:250941-251330:- | gene-YBR013C_CAT1 | rna-NM_001178361.1_CAT1 | cds-NP_009569.1_CAT1 | 99.2 | 100.0 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005360.1:239995-240384:- | gene-YBR013C_CBS1585 | rna-NM_001178361.1_CBS1585 | cds-NP_009569.1_CBS1585 | 99.2 | 100.0 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005344.1:248231-248620:- | gene-YBR013C_CBS436 | rna-NM_001178361.1_CBS436 | cds-NP_009569.1_CBS436 | 98.9 | 100.0 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005328.1:338498-338887:- | gene-YBR013C_CBS6412 | rna-NM_001178361.1_CBS6412 | cds-NP_009569.1_CBS6412 | 99.2 | 100.0 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005312.1:245362-245751:- | gene-YBR013C_CBS6413 | rna-NM_001178361.1_CBS6413 | cds-NP_009569.1_CBS6413 | 99.2 | 100.0 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001523.1:259262-259651:- | gene-YBR013C_CENPK1137D | rna-NM_001178361.1_CENPK1137D | cds-NP_009569.1_CENPK1137D | 95.3 | 100.0 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005472.1:374955-375344:- | gene-YBR013C_EthanolRed | rna-NM_001178361.1_EthanolRed | cds-NP_009569.1_EthanolRed | 99.2 | 100.0 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005536.1:263052-263441:- | gene-YBR013C_FaliES1 | rna-NM_001178361.1_FaliES1 | cds-NP_009569.1_FaliES1 | 99.2 | 100.0 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000048.1:34167-34556:+ | gene-YBR013C_JAY291 | rna-NM_001178361.1_JAY291 | cds-NP_009569.1_JAY291 | 98.9 | 100.0 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005408.1:249011-249400:- | gene-YBR013C_MUCL30387 | rna-NM_001178361.1_MUCL30387 | cds-NP_009569.1_MUCL30387 | 98.9 | 100.0 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005440.1:249511-249900:- | gene-YBR013C_MUCL30388 | rna-NM_001178361.1_MUCL30388 | cds-NP_009569.1_MUCL30388 | 99.2 | 100.0 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005280.1:239977-240366:- | gene-YBR013C_MUCL39482 | rna-NM_001178361.1_MUCL39482 | cds-NP_009569.1_MUCL39482 | 99.2 | 100.0 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005424.1:247413-247802:- | gene-YBR013C_MUCL42920 | rna-NM_001178361.1_MUCL42920 | cds-NP_009569.1_MUCL42920 | 99.2 | 100.0 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011811.1:265289-265678:- | gene-YBR013C_NCIM3186 | rna-NM_001178361.1_NCIM3186 | cds-NP_009569.1_NCIM3186 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005264.1:241153-241542:- | gene-YBR013C_NCYC1407 | rna-NM_001178361.1_NCYC1407 | cds-NP_009569.1_NCYC1407 | 99.2 | 100.0 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994141.1:253304-253693:- | gene-YBR013C_PE2H3 | rna-NM_001178361.1_PE2H3 | cds-NP_009569.1_PE2H3 | 98.9 | 100.0 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999873.1:250972-251361:- | gene-YBR013C_PE2H4 | rna-NM_001178361.1_PE2H4 | cds-NP_009569.1_PE2H4 | 98.9 | 100.0 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001134.8:265492-265881:- | gene-YBR013C_S288C | rna-NM_001178361.1_S288C | cds-NP_009569.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000037.1:42819-43208:+ | gene-YBR013C_SA1 | rna-NM_001178361.1_SA1 | cds-NP_009569.1_SA1 | 99.2 | 100.0 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005488.1:262761-263150:- | gene-YBR013C_ThermosaccDry | rna-NM_001178361.1_ThermosaccDry | cds-NP_009569.1_ThermosaccDry | 99.2 | 100.0 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005456.1:244656-245045:- | gene-YBR013C_VR1 | rna-NM_001178361.1_VR1 | cds-NP_009569.1_VR1 | 99.2 | 100.0 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000003.1:238743-239132:- | gene-YBR013C_ZTW1 | rna-NM_001178361.1_ZTW1 | cds-NP_009569.1_ZTW1 | 99.2 | 100.0 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047488.1:274584-274973:- | gene-YBR013C_Sparadoxus | rna-NM_001178361.1_Sparadoxus | cds-NP_009569.1_Sparadoxus | 91.5 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |