Gene name: YBL113C
Reference locus (S288C): YBL113C
Gene biotype: protein_coding
Description: Uncharacterized protein YBL113C; Helicase-like protein encoded within the telomeric Y' element
Top 10 interactors (score): YBL111C (0.989); YBL109W (0.952); YBL113W-A (0.92); YRF1-3 (0.874); YHL050C (0.874); YLL067C (0.874); YLL066C (0.874); YRF1-5 (0.873); YJL225C (0.873); YEL077C (0.873); YRF1-6 (0.873); YRF1-2 (0.873); YRF1-7 (0.873); YRF1-4 (0.873); YIL177C (0.873); YHR218W (0.872); YHR219W (0.872); YML133C (0.872); YFL066C (0.872); YRF1-1 (0.872)
Homologues (species, bitscore): Khdc3 (Mus musculus, 63.5)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005303.1:665-2811:- | gene-YBL113C_AKU4011 | rna-NM_001180054.1_AKU4011 | cds-NP_009437.1_AKU4011 | 87.8 | 90.2 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005504.1:1-2392:- | gene-YBL113C_Bruggeman | rna-NM_001180054.1_Bruggeman | cds-NP_009437.1_Bruggeman | 70.1 | 85.6 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005532.1:33-1551:- | gene-YBL113C_CAT1 | rna-NM_001180054.1_CAT1 | cds-NP_009437.1_CAT1 | 34.0 | 41.9 | Unannotated | 1 | 1 | 0 | False | False | True | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005368.1:665-3018:- | gene-YBL113C_CBS1585 | rna-NM_001180054.1_CBS1585 | cds-NP_009437.1_CBS1585 | 92.7 | 98.9 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005355.1:178-2051:- | gene-YBL113C_CBS436 | rna-NM_001180054.1_CBS436 | cds-NP_009437.1_CBS436 | 77.7 | 78.7 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005315.1:1-940:- | gene-YBL113C_CBS6413 | rna-NM_001180054.1_CBS6413 | cds-NP_009437.1_CBS6413 | 34.8 | 38.6 | Mismatch | 1 | 1 | 0 | False | False | True | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001526.1:1-203:- | gene-YBL113C_CENPK1137D | rna-NM_001180054.1_CENPK1137D | cds-NP_009437.1_CENPK1137D | 7.6 | 8.5 | Mismatch | 1 | 1 | 0 | False | False | True | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005474.1:1472814-1474708:+ | gene-YBL113C_EthanolRed | rna-NM_001180054.1_EthanolRed | cds-NP_009437.1_EthanolRed | 78.1 | 79.6 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005543.1:554-2448:- | gene-YBL113C_FaliES1 | rna-NM_001180054.1_FaliES1 | cds-NP_009437.1_FaliES1 | 78.1 | 79.6 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000286.1:1-189:- | gene-YBL113C_JAY291 | rna-NM_001180054.1_JAY291 | cds-NP_009437.1_JAY291 | 7.9 | 7.9 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | MBVW01000206.1:1-987:+ | gene-YBL113C_MUCL30388 | rna-NM_001180054.1_MUCL30388 | cds-NP_009437.1_MUCL30388 | 40.7 | 41.4 | Mismatch | 1 | 1 | 0 | False | False | True | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | MBVN01000037.1:1-818:+ | gene-YBL113C_MUCL39482 | rna-NM_001180054.1_MUCL39482 | cds-NP_009437.1_MUCL39482 | 32.1 | 34.3 | Mismatch | 1 | 1 | 0 | False | False | True | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005431.1:1133-3543:- | gene-YBL113C_MUCL42920 | rna-NM_001180054.1_MUCL42920 | cds-NP_009437.1_MUCL42920 | 53.6 | 86.8 | Unannotated | 1 | 1 | 0 | False | False | True | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011811.1:77-2455:- | gene-YBL113C_NCIM3186 | rna-NM_001180054.1_NCIM3186 | cds-NP_009437.1_NCIM3186 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994150.1:554-2715:- | gene-YBL113C_PE2H3 | rna-NM_001180054.1_PE2H3 | cds-NP_009437.1_PE2H3 | 89.5 | 90.8 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999876.1:428-2265:- | gene-YBL113C_PE2H4 | rna-NM_001180054.1_PE2H4 | cds-NP_009437.1_PE2H4 | 76.6 | 77.2 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001134.8:280-2658:- | gene-YBL113C_S288C | rna-NM_001180054.1_S288C | cds-NP_009437.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005495.1:715-2609:- | gene-YBL113C_ThermosaccDry | rna-NM_001180054.1_ThermosaccDry | cds-NP_009437.1_ThermosaccDry | 78.1 | 79.6 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005466.1:1-1658:- | gene-YBL113C_VR1 | rna-NM_001180054.1_VR1 | cds-NP_009437.1_VR1 | 56.4 | 69.6 | Unannotated | 1 | 1 | 0 | False | False | True | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047488.1:833413-835307:+ | gene-YBL113C_Sparadoxus | rna-NM_001180054.1_Sparadoxus | cds-NP_009437.1_Sparadoxus | 77.8 | 79.6 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |