Gene name: YBL036C
Reference locus (S288C): YBL036C
Gene biotype: protein_coding
Description: Pyridoxal phosphate homeostasis protein; Putative non-specific single-domain racemase; based on structural similarity; binds pyridoxal 5'-phosphate; expression of GFP-fusion protein induced in response to the DNA-damaging agent MMS
Top 10 interactors (score): AIM29 (0.847); PRO3 (0.784); URA7 (0.761); DDI3 (0.746); REE1 (0.699); FUI1 (0.698); APL3 (0.672); PDX3 (0.664); ERD2 (0.651); DDR48 (0.621); COR1 (0.596); DAL4 (0.591); TYS1 (0.572); GUK1 (0.57); OXP1 (0.56); GPI12 (0.551); YML096W (0.541); NNR1 (0.526); MRPS8 (0.524); GRX3 (0.522)
Homologues (species, bitscore): PROSC (Homo sapiens, 150.2); Prosc (Mus musculus, 156.8); prosc (Danio rerio, 149.1); PROSC (Xenopus tropicalis, 153.7); CG1983 (Drosophila melanogaster, 156.0); F09E5.8 (Caenorhabditis elegans, 163.7); AT1G11930 (Arabidopsis thaliana, 150.6)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005296.1:144063-144836:- | gene-YBL036C_AKU4011 | rna-NM_001178276.1_AKU4011 | cds-NP_009517.1_AKU4011 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000179.1:134880-135653:- | gene-YBL036C_BG1 | rna-NM_001178276.1_BG1 | cds-NP_009517.1_BG1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005504.1:144646-145419:- | gene-YBL036C_Bruggeman | rna-NM_001178276.1_Bruggeman | cds-NP_009517.1_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005520.1:147276-148049:- | gene-YBL036C_CAT1 | rna-NM_001178276.1_CAT1 | cds-NP_009517.1_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005360.1:136602-137375:- | gene-YBL036C_CBS1585 | rna-NM_001178276.1_CBS1585 | cds-NP_009517.1_CBS1585 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005344.1:145111-145884:- | gene-YBL036C_CBS436 | rna-NM_001178276.1_CBS436 | cds-NP_009517.1_CBS436 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005328.1:235358-236131:- | gene-YBL036C_CBS6412 | rna-NM_001178276.1_CBS6412 | cds-NP_009517.1_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005312.1:142173-142946:- | gene-YBL036C_CBS6413 | rna-NM_001178276.1_CBS6413 | cds-NP_009517.1_CBS6413 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001523.1:144198-144971:- | gene-YBL036C_CENPK1137D | rna-NM_001178276.1_CENPK1137D | cds-NP_009517.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005472.1:158023-158796:- | gene-YBL036C_EthanolRed | rna-NM_001178276.1_EthanolRed | cds-NP_009517.1_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005536.1:158870-159643:- | gene-YBL036C_FaliES1 | rna-NM_001178276.1_FaliES1 | cds-NP_009517.1_FaliES1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000072.1:61504-62277:- | gene-YBL036C_JAY291 | rna-NM_001178276.1_JAY291 | cds-NP_009517.1_JAY291 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005408.1:144025-144798:- | gene-YBL036C_MUCL30387 | rna-NM_001178276.1_MUCL30387 | cds-NP_009517.1_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005440.1:145296-146069:- | gene-YBL036C_MUCL30388 | rna-NM_001178276.1_MUCL30388 | cds-NP_009517.1_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005280.1:136777-137550:- | gene-YBL036C_MUCL39482 | rna-NM_001178276.1_MUCL39482 | cds-NP_009517.1_MUCL39482 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005424.1:143609-144382:- | gene-YBL036C_MUCL42920 | rna-NM_001178276.1_MUCL42920 | cds-NP_009517.1_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011811.1:150244-151017:- | gene-YBL036C_NCIM3186 | rna-NM_001178276.1_NCIM3186 | cds-NP_009517.1_NCIM3186 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005264.1:137914-138687:- | gene-YBL036C_NCYC1407 | rna-NM_001178276.1_NCYC1407 | cds-NP_009517.1_NCYC1407 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994141.1:144181-144954:- | gene-YBL036C_PE2H3 | rna-NM_001178276.1_PE2H3 | cds-NP_009517.1_PE2H3 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999873.1:141825-142598:- | gene-YBL036C_PE2H4 | rna-NM_001178276.1_PE2H4 | cds-NP_009517.1_PE2H4 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001134.8:150447-151220:- | gene-YBL036C_S288C | rna-NM_001178276.1_S288C | cds-NP_009517.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000051.1:35032-35805:- | gene-YBL036C_SA1 | rna-NM_001178276.1_SA1 | cds-NP_009517.1_SA1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005488.1:158823-159596:- | gene-YBL036C_ThermosaccDry | rna-NM_001178276.1_ThermosaccDry | cds-NP_009517.1_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005456.1:141010-141783:- | gene-YBL036C_VR1 | rna-NM_001178276.1_VR1 | cds-NP_009517.1_VR1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000003.1:135542-136315:- | gene-YBL036C_ZTW1 | rna-NM_001178276.1_ZTW1 | cds-NP_009517.1_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047488.1:170416-171189:- | gene-YBL036C_Sparadoxus | rna-NM_001178276.1_Sparadoxus | cds-NP_009517.1_Sparadoxus | 89.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |