Gene name: YAR028W
Reference locus (S288C): YAR028W
Gene biotype: protein_coding
Description: DUP240 protein YAR028W; Putative integral membrane protein; member of DUP240 gene family; GFP-fusion protein is induced in response to the DNA-damaging agent MMS
Top 10 interactors (score): YAR029W (0.985); UIP3 (0.969); MST28 (0.915); PRM9 (0.854); ENV10 (0.817); TPO5 (0.813); SLY41 (0.749); GET2 (0.712); GET1 (0.695); PHS1 (0.645); AIM6 (0.568); YDL012C (0.483)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005295.1:168446-169150:+ | gene-YAR028W_AKU4011 | rna-NM_001178222.1_AKU4011 | cds-NP_009415.1_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000206.1:5953-6657:- | gene-YAR028W_BG1 | rna-NM_001178222.1_BG1 | cds-NP_009415.1_BG1 | 98.0 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | False | True |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005503.1:180694-181398:+ | gene-YAR028W_Bruggeman | rna-NM_001178222.1_Bruggeman | cds-NP_009415.1_Bruggeman | 98.2 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | False | True |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005519.1:171677-172381:+ | gene-YAR028W_CAT1 | rna-NM_001178222.1_CAT1 | cds-NP_009415.1_CAT1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | MBVS01000040.1:1146-1850:+ | gene-YAR028W_CBS1585 | rna-NM_001178222.1_CBS1585 | cds-NP_009415.1_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005343.1:177410-178114:+ | gene-YAR028W_CBS436 | rna-NM_001178222.1_CBS436 | cds-NP_009415.1_CBS436 | 98.0 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | False | True |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005327.1:214595-215299:+ | gene-YAR028W_CBS6412 | rna-NM_001178222.1_CBS6412 | cds-NP_009415.1_CBS6412 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005311.1:175654-176358:+ | gene-YAR028W_CBS6413 | rna-NM_001178222.1_CBS6413 | cds-NP_009415.1_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001522.1:184803-185507:+ | gene-YAR028W_CENPK1137D | rna-NM_001178222.1_CENPK1137D | cds-NP_009415.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005471.1:165330-166034:+ | gene-YAR028W_EthanolRed | rna-NM_001178222.1_EthanolRed | cds-NP_009415.1_EthanolRed | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005535.1:182848-183552:+ | gene-YAR028W_FaliES1 | rna-NM_001178222.1_FaliES1 | cds-NP_009415.1_FaliES1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000270.1:1811-2515:- | gene-YAR028W_JAY291 | rna-NM_001178222.1_JAY291 | cds-NP_009415.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | MBVX01000069.1:7222-7926:+ | gene-YAR028W_MUCL30387 | rna-NM_001178222.1_MUCL30387 | cds-NP_009415.1_MUCL30387 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005439.1:181483-182187:+ | gene-YAR028W_MUCL30388 | rna-NM_001178222.1_MUCL30388 | cds-NP_009415.1_MUCL30388 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005279.1:175636-176340:+ | gene-YAR028W_MUCL39482 | rna-NM_001178222.1_MUCL39482 | cds-NP_009415.1_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | MBVV01000283.1:2361-3065:- | gene-YAR028W_MUCL42920 | rna-NM_001178222.1_MUCL42920 | cds-NP_009415.1_MUCL42920 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011810.1:184769-185473:+ | gene-YAR028W_NCIM3186 | rna-NM_001178222.1_NCIM3186 | cds-NP_009415.1_NCIM3186 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | MBVM01000054.1:676-1380:- | gene-YAR028W_NCYC1407 | rna-NM_001178222.1_NCYC1407 | cds-NP_009415.1_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994140.1:172277-172981:+ | gene-YAR028W_PE2H3 | rna-NM_001178222.1_PE2H3 | cds-NP_009415.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999872.1:171996-172700:+ | gene-YAR028W_PE2H4 | rna-NM_001178222.1_PE2H4 | cds-NP_009415.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001133.9:184892-185596:+ | gene-YAR028W_S288C | rna-NM_001178222.1_S288C | cds-NP_009415.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000130.1:3587-4291:+ | gene-YAR028W_SA1 | rna-NM_001178222.1_SA1 | cds-NP_009415.1_SA1 | 98.1 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | False | True |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005487.1:180173-180877:+ | gene-YAR028W_ThermosaccDry | rna-NM_001178222.1_ThermosaccDry | cds-NP_009415.1_ThermosaccDry | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005455.1:188755-189459:+ | gene-YAR028W_VR1 | rna-NM_001178222.1_VR1 | cds-NP_009415.1_VR1 | 98.0 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | False | True |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000002.1:156058-156762:+ | gene-YAR028W_ZTW1 | rna-NM_001178222.1_ZTW1 | cds-NP_009415.1_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |