YAR023C (YAR023C)

Gene profile

Gene name: YAR023C
Reference locus (S288C): YAR023C
Gene biotype: protein_coding

Description: Putative integral membrane protein; member of DUP240 gene family; Belongs to the DUP/COS family

Top 10 interactors (score): TIM22 (0.82); MHT1 (0.741); MES1 (0.691); YGL182C (0.572); AIM26 (0.499); YLR235C (0.499); CIN10 (0.45); YLR053C (0.45)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005295.1:158778-159317:- gene-YAR023C_AKU4011 rna-NM_001178220.2_AKU4011 cds-NP_009413.2_AKU4011 98.5 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000193.1:13438-13977:- gene-YAR023C_BG1 rna-NM_001178220.2_BG1 cds-NP_009413.2_BG1 99.2 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005503.1:174795-175334:- gene-YAR023C_Bruggeman rna-NM_001178220.2_Bruggeman cds-NP_009413.2_Bruggeman 99.2 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005519.1:160417-160956:- gene-YAR023C_CAT1 rna-NM_001178220.2_CAT1 cds-NP_009413.2_CAT1 99.4 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005359.1:171481-172020:- gene-YAR023C_CBS1585 rna-NM_001178220.2_CBS1585 cds-NP_009413.2_CBS1585 100.0 100.0 Verified 1 1 1 True True False False False
CBS436 GCA_001738355.1 Sake Asia CM005343.1:171802-172341:- gene-YAR023C_CBS436 rna-NM_001178220.2_CBS436 cds-NP_009413.2_CBS436 99.2 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005338.1:784219-784758:- gene-YAR023C_CBS6412 rna-NM_001178220.2_CBS6412 cds-NP_009413.2_CBS6412 98.7 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005311.1:169742-170281:- gene-YAR023C_CBS6413 rna-NM_001178220.2_CBS6413 cds-NP_009413.2_CBS6413 98.7 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001522.1:179194-179733:- gene-YAR023C_CENPK1137D rna-NM_001178220.2_CENPK1137D cds-NP_009413.2_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005471.1:159336-159875:- gene-YAR023C_EthanolRed rna-NM_001178220.2_EthanolRed cds-NP_009413.2_EthanolRed 98.7 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005535.1:175468-176007:- gene-YAR023C_FaliES1 rna-NM_001178220.2_FaliES1 cds-NP_009413.2_FaliES1 98.7 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000205.1:2288-2827:- gene-YAR023C_JAY291 rna-NM_001178220.2_JAY291 cds-NP_009413.2_JAY291 99.2 100.0 Verified 1 1 1 False True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005407.1:175332-175871:- gene-YAR023C_MUCL30387 rna-NM_001178220.2_MUCL30387 cds-NP_009413.2_MUCL30387 98.8 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005439.1:172232-172771:- gene-YAR023C_MUCL30388 rna-NM_001178220.2_MUCL30388 cds-NP_009413.2_MUCL30388 98.5 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005279.1:170730-171269:- gene-YAR023C_MUCL39482 rna-NM_001178220.2_MUCL39482 cds-NP_009413.2_MUCL39482 98.7 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005423.1:173133-173672:- gene-YAR023C_MUCL42920 rna-NM_001178220.2_MUCL42920 cds-NP_009413.2_MUCL42920 99.0 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011810.1:179158-179697:- gene-YAR023C_NCIM3186 rna-NM_001178220.2_NCIM3186 cds-NP_009413.2_NCIM3186 97.2 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005263.1:158142-158681:- gene-YAR023C_NCYC1407 rna-NM_001178220.2_NCYC1407 cds-NP_009413.2_NCYC1407 98.8 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994140.1:166332-166871:- gene-YAR023C_PE2H3 rna-NM_001178220.2_PE2H3 cds-NP_009413.2_PE2H3 99.2 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999872.1:166051-166590:- gene-YAR023C_PE2H4 rna-NM_001178220.2_PE2H4 cds-NP_009413.2_PE2H4 99.2 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001133.9:179281-179820:- gene-YAR023C_S288C rna-NM_001178220.2_S288C cds-NP_009413.2_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000100.1:32080-32619:- gene-YAR023C_SA1 rna-NM_001178220.2_SA1 cds-NP_009413.2_SA1 99.2 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005487.1:174004-174543:- gene-YAR023C_ThermosaccDry rna-NM_001178220.2_ThermosaccDry cds-NP_009413.2_ThermosaccDry 98.7 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America MBVZ01000208.1:3-542:- gene-YAR023C_VR1 rna-NM_001178220.2_VR1 cds-NP_009413.2_VR1 99.2 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000002.1:146164-146703:- gene-YAR023C_ZTW1 rna-NM_001178220.2_ZTW1 cds-NP_009413.2_ZTW1 98.8 100.0 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047487.1:163531-164070:- gene-YAR023C_Sparadoxus rna-NM_001178220.2_Sparadoxus cds-NP_009413.2_Sparadoxus 88.3 99.6 Verified 1 1 1 False True False False False

Additional files