Gene name: YAP6
Reference locus (S288C): YDR259C
Gene biotype: protein_coding
Description: Basic leucine zipper (bZIP) transcription factor; physically interacts with the Tup1-Cyc8 complex and recruits Tup1p to its targets; overexpression increases sodium and lithium tolerance; computational analysis suggests a role in regulation of expression of genes involved in carbohydrate metabolism; YAP6 has a paralog, CIN5, that arose from the whole genome duplication
Top 10 interactors (score): PHD1 (0.865); SOK2 (0.857); SKN7 (0.813); YAP5 (0.813); SKO1 (0.812); ROX1 (0.811); CUP9 (0.803); YAP7 (0.748); CYC8 (0.735); YAP1 (0.713); ARR1 (0.711); FHL1 (0.698); REB1 (0.695); SWI4 (0.695); MSN2 (0.679); HAP4 (0.671); MCM1 (0.654); CAD1 (0.618); MOT3 (0.617); GAT3 (0.615)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005298.1:930994-932145:- | gene-YDR259C_AKU4011 | rna-NM_001180567.3_AKU4011 | cds-NP_010545.3_AKU4011 | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000080.1:193127-194278:+ | gene-YDR259C_BG1 | rna-NM_001180567.3_BG1 | cds-NP_010545.3_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005506.1:963324-964475:- | gene-YDR259C_Bruggeman | rna-NM_001180567.3_Bruggeman | cds-NP_010545.3_Bruggeman | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005522.1:950601-951752:- | gene-YDR259C_CAT1 | rna-NM_001180567.3_CAT1 | cds-NP_010545.3_CAT1 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005362.1:921343-922494:- | gene-YDR259C_CBS1585 | rna-NM_001180567.3_CBS1585 | cds-NP_010545.3_CBS1585 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005346.1:950867-952018:- | gene-YDR259C_CBS436 | rna-NM_001180567.3_CBS436 | cds-NP_010545.3_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005330.1:918103-919254:- | gene-YDR259C_CBS6412 | rna-NM_001180567.3_CBS6412 | cds-NP_010545.3_CBS6412 | 98.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005314.1:949197-950348:- | gene-YDR259C_CBS6413 | rna-NM_001180567.3_CBS6413 | cds-NP_010545.3_CBS6413 | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001525.1:973554-974702:- | gene-YDR259C_CENPK1137D | rna-NM_001180567.3_CENPK1137D | cds-NP_010545.3_CENPK1137D | 99.5 | 99.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005474.1:931661-932812:- | gene-YDR259C_EthanolRed | rna-NM_001180567.3_EthanolRed | cds-NP_010545.3_EthanolRed | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005538.1:939863-941014:- | gene-YDR259C_FaliES1 | rna-NM_001180567.3_FaliES1 | cds-NP_010545.3_FaliES1 | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000261.1:28363-29514:- | gene-YDR259C_JAY291 | rna-NM_001180567.3_JAY291 | cds-NP_010545.3_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005410.1:949222-950373:- | gene-YDR259C_MUCL30387 | rna-NM_001180567.3_MUCL30387 | cds-NP_010545.3_MUCL30387 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005442.1:937252-938403:- | gene-YDR259C_MUCL30388 | rna-NM_001180567.3_MUCL30388 | cds-NP_010545.3_MUCL30388 | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005282.1:922748-923899:- | gene-YDR259C_MUCL39482 | rna-NM_001180567.3_MUCL39482 | cds-NP_010545.3_MUCL39482 | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005426.1:862507-863658:- | gene-YDR259C_MUCL42920 | rna-NM_001180567.3_MUCL42920 | cds-NP_010545.3_MUCL42920 | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011813.1:974554-975705:- | gene-YDR259C_NCIM3186 | rna-NM_001180567.3_NCIM3186 | cds-NP_010545.3_NCIM3186 | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005266.1:926417-927568:- | gene-YDR259C_NCYC1407 | rna-NM_001180567.3_NCYC1407 | cds-NP_010545.3_NCYC1407 | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994143.1:942640-943791:- | gene-YDR259C_PE2H3 | rna-NM_001180567.3_PE2H3 | cds-NP_010545.3_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:947917-949068:- | gene-YDR259C_PE2H4 | rna-NM_001180567.3_PE2H4 | cds-NP_010545.3_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:974631-975782:- | gene-YDR259C_S288C | rna-NM_001180567.3_S288C | cds-NP_010545.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000013.1:180477-181628:- | gene-YDR259C_SA1 | rna-NM_001180567.3_SA1 | cds-NP_010545.3_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005490.1:938017-939168:- | gene-YDR259C_ThermosaccDry | rna-NM_001180567.3_ThermosaccDry | cds-NP_010545.3_ThermosaccDry | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005458.1:953241-954392:- | gene-YDR259C_VR1 | rna-NM_001180567.3_VR1 | cds-NP_010545.3_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000007.1:200763-201914:- | gene-YDR259C_ZTW1 | rna-NM_001180567.3_ZTW1 | cds-NP_010545.3_ZTW1 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:943395-944567:- | gene-YDR259C_Sparadoxus | rna-NM_001180567.3_Sparadoxus | cds-NP_010545.3_Sparadoxus | 85.1 | 99.2 | Verified | 1 | 1 | 1 | False | True | False | False | False |